Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL008729.2-201ENST00000606393 473 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 AC145207.9-201ENST00000623802 325 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.37□□□□□ -1.71
NEDD4P46934 AP000553.6-201ENST00000641242 118 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NEDD4P46934 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD4P46934 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.37□□□□□ -1.71
NEDD4P46934 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NEDD4P46934 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD4P46934 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NEDD4P46934 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
NEDD4P46934 MTND5P11-201ENST00000511037 1812 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD4P46934 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD4P46934 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD4P46934 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD4P46934 RNU6-252P-201ENST00000363232 107 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 RNU6-666P-201ENST00000363499 107 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD4P46934 RPL21P17-201ENST00000397467 475 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.36□□□□□ -1.71
NEDD4P46934 XKRYP4-201ENST00000414395 483 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.36□□□□□ -1.71
NEDD4P46934 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD4P46934 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.36□□□□□ -1.71
NEDD4P46934 CACYBPP1-201ENST00000438592 684 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 RPS27P5-201ENST00000444247 244 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NEDD4P46934 AL133547.1-201ENST00000448546 220 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD4P46934 XKRYP5-201ENST00000449659 483 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 AC006480.1-201ENST00000449887 378 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.36□□□□□ -1.71
NEDD4P46934 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.36□□□□□ -1.71
NEDD4P46934 AC022034.3-201ENST00000471393 478 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 AC025459.1-201ENST00000504072 156 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD4P46934 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.36□□□□□ -1.71
NEDD4P46934 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.36□□□□□ -1.71
NEDD4P46934 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.36□□□□□ -1.71
NEDD4P46934 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.36□□□□□ -1.71
NEDD4P46934 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.36□□□□□ -1.71
NEDD4P46934 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.36□□□□□ -1.71
NEDD4P46934 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.36□□□□□ -1.71
NEDD4P46934 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.36□□□□□ -1.71
NEDD4P46934 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.36□□□□□ -1.71
NEDD4P46934 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.36□□□□□ -1.71
NEDD4P46934 MIR8084-201ENST00000614105 89 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 LINC00901.1-201ENST00000617252 152 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.36□□□□□ -1.71
NEDD4P46934 CR392039.5-201ENST00000623201 510 ntBASIC4.36□□□□□ -1.71
NEDD4P46934 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.36□□□□□ -1.71
NEDD4P46934 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.36□□□□□ -1.71
NEDD4P46934 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.36□□□□□ -1.71
NEDD4P46934 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.36□□□□□ -1.71
NEDD4P46934 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD4P46934 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
NEDD4P46934 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD4P46934 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.35□□□□□ -1.71
NEDD4P46934 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.35□□□□□ -1.71
NEDD4P46934 AC009229.4-201ENST00000623854 1947 ntBASIC4.35□□□□□ -1.71
NEDD4P46934 SNORA73.2-201ENST00000364946 201 ntBASIC4.35□□□□□ -1.71
NEDD4P46934 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NEDD4P46934 SYF2P2-201ENST00000417620 583 ntBASIC4.35□□□□□ -1.71
NEDD4P46934 HMGB3P20-201ENST00000417997 600 ntBASIC4.35□□□□□ -1.71
NEDD4P46934 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.35□□□□□ -1.71
NEDD4P46934 AC006511.1-201ENST00000470614 315 ntBASIC4.35□□□□□ -1.71
NEDD4P46934 SETP6-201ENST00000479329 568 ntBASIC4.35□□□□□ -1.71
NEDD4P46934 AC107398.1-201ENST00000486904 505 ntBASIC4.35□□□□□ -1.71
NEDD4P46934 HIGD1AP18-201ENST00000520730 278 ntBASIC4.35□□□□□ -1.71
NEDD4P46934 CIR1P1-201ENST00000524055 1133 ntBASIC4.35□□□□□ -1.71
NEDD4P46934 AC019227.1-201ENST00000526902 510 ntBASIC4.35□□□□□ -1.71
NEDD4P46934 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.35□□□□□ -1.71
NEDD4P46934 AC006960.3-201ENST00000561845 705 ntBASIC4.35□□□□□ -1.71
NEDD4P46934 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.35□□□□□ -1.71
NEDD4P46934 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.35□□□□□ -1.71
NEDD4P46934 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.35□□□□□ -1.71
NEDD4P46934 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NEDD4P46934 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NEDD4P46934 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.35□□□□□ -1.71
NEDD4P46934 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
NEDD4P46934 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NEDD4P46934 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NEDD4P46934 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
NEDD4P46934 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD4P46934 AL122126.1-201ENST00000546905 1318 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.34□□□□□ -1.71
NEDD4P46934 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NEDD4P46934 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NEDD4P46934 MIR16-2-201ENST00000362117 81 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 SNORA5A-201ENST00000384111 134 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 RNU6-532P-201ENST00000384318 107 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 AL158050.1-201ENST00000416077 457 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD4P46934 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.34□□□□□ -1.71
NEDD4P46934 AC022022.1-201ENST00000430304 178 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 AL512661.1-201ENST00000434586 1253 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 RPL34P26-201ENST00000445636 354 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms