Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 snoU13.22-201ENST00000459428 104 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 RPL21P11-201ENST00000461458 483 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 AC104689.1-201ENST00000473356 768 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 PPIAP15-201ENST00000479662 484 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 OR5H4P-201ENST00000510851 923 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 RPL7L1P13-201ENST00000511702 739 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 AC112206.4-201ENST00000515142 405 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 AL442163.2-201ENST00000553912 710 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 AP000919.1-202ENST00000581139 1264 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 BNIP3P19-201ENST00000605397 577 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 AC016542.1-201ENST00000608259 493 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 AC253576.2-201ENST00000618815 580 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 AC018926.3-201ENST00000618841 406 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 AC006249.1-201ENST00000621223 471 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 AC092608.3-201ENST00000625017 386 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
TNFRSF4P43489 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TNFRSF4P43489 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 AL139811.1-201ENST00000424779 2299 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFRSF4P43489 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFRSF4P43489 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFRSF4P43489 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TNFRSF4P43489 RNA5SP124-201ENST00000362739 110 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 RNA5SP399-201ENST00000364003 117 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TNFRSF4P43489 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 SNORA11C-201ENST00000408532 129 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 MIR1251-201ENST00000408552 70 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TNFRSF4P43489 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 UBE2V1P6-201ENST00000430840 422 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 AL512637.2-201ENST00000431287 1256 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 AL096803.2-201ENST00000450032 677 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 DNAJC19P8-201ENST00000452887 259 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 NANOGP10-201ENST00000453325 895 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 MRPL35P4-201ENST00000453682 566 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC110792.2-201ENST00000510278 224 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC093853.1-201ENST00000515689 483 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 HMGB1P1-201ENST00000522557 636 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC011611.5-201ENST00000552477 578 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC021851.1-201ENST00000608537 1082 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC005344.1-201ENST00000613391 459 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 AL356121.2-201ENST00000624715 780 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFRSF4P43489 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TNFRSF4P43489 AP004289.2-201ENST00000444413 1457 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 AC126323.6-202ENST00000568092 3511 ntBASIC4.02□□□□□ -1.77
TNFRSF4P43489 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFRSF4P43489 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFRSF4P43489 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFRSF4P43489 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 NSRP1P1-201ENST00000444067 1693 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 SNORA73.2-201ENST00000364946 201 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 PRELID3BP11-201ENST00000414230 479 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 IPMKP1-201ENST00000425988 855 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 NPM1P34-201ENST00000428821 893 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 RPL7P4-203ENST00000430239 730 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms