Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 OR5AN2P-201ENST00000534535 896 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
PTPN9P43378 PDCD5P1-201ENST00000543528 309 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.62□□□□□ -1.67
PTPN9P43378 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.62□□□□□ -1.67
PTPN9P43378 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.62□□□□□ -1.67
PTPN9P43378 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.62□□□□□ -1.67
PTPN9P43378 AC009712.1-201ENST00000564938 316 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 RPL12P25-202ENST00000598100 674 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 AC079587.1-201ENST00000603846 277 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 AC091488.1-201ENST00000604239 660 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 AL160290.3-201ENST00000604869 165 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 AC019193.2-201ENST00000610012 634 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 AC124312.6-202ENST00000623624 418 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.62□□□□□ -1.67
PTPN9P43378 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN9P43378 NOL8P1-201ENST00000508336 3529 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.62□□□□□ -1.67
PTPN9P43378 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
PTPN9P43378 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN9P43378 AC104454.1-201ENST00000421341 1401 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.62□□□□□ -1.67
PTPN9P43378 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN9P43378 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN9P43378 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN9P43378 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN9P43378 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN9P43378 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN9P43378 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN9P43378 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN9P43378 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PTPN9P43378 IL6STP1-201ENST00000346911 1020 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 RNA5SP332-201ENST00000391063 115 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 RNU6-272P-201ENST00000411028 104 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 RPL21P108-201ENST00000413857 481 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 TMSB10P2-201ENST00000416049 131 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 AL139095.3-201ENST00000419672 1203 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 AL356387.2-201ENST00000422272 243 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 RPS26P47-201ENST00000427219 348 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 AL353597.2-202ENST00000434901 373 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 AL008629.1-201ENST00000438615 184 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN9P43378 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN9P43378 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN9P43378 RPL21P126-201ENST00000470049 478 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 UBA52P3-201ENST00000491303 382 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN9P43378 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN9P43378 AC010198.2-201ENST00000550612 259 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 ZNF321P-202ENST00000550843 495 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 DUXAP6-201ENST00000553858 601 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN9P43378 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN9P43378 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN9P43378 BNIP3P24-201ENST00000593398 557 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 AL390838.2-201ENST00000602394 274 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 AC104785.1-201ENST00000603220 588 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN9P43378 AC093765.1-201ENST00000603758 881 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN9P43378 Z98200.1-201ENST00000607298 470 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN9P43378 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN9P43378 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN9P43378 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN9P43378 AL450326.2-201ENST00000421913 1962 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN9P43378 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN9P43378 Z98755.1-201ENST00000407015 1384 ntBASIC4.61□□□□□ -1.67
PTPN9P43378 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN9P43378 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
PTPN9P43378 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PTPN9P43378 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN9P43378 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
PTPN9P43378 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN9P43378 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
PTPN9P43378 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN9P43378 RPS4XP9-201ENST00000405151 780 ntBASIC4.6□□□□□ -1.67
PTPN9P43378 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN9P43378 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN9P43378 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN9P43378 RPL7P44-201ENST00000424827 742 ntBASIC4.6□□□□□ -1.67
PTPN9P43378 CENPIP1-201ENST00000425713 902 ntBASIC4.6□□□□□ -1.67
PTPN9P43378 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN9P43378 RPEP2-201ENST00000432149 701 ntBASIC4.6□□□□□ -1.67
PTPN9P43378 SETP8-201ENST00000435341 628 ntBASIC4.6□□□□□ -1.67
PTPN9P43378 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.6□□□□□ -1.67
PTPN9P43378 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN9P43378 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN9P43378 AL034418.1-201ENST00000448675 860 ntBASIC4.6□□□□□ -1.67
PTPN9P43378 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN9P43378 RFC5P1-201ENST00000454419 874 ntBASIC4.6□□□□□ -1.67
PTPN9P43378 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN9P43378 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN9P43378 RPL5P30-201ENST00000465511 891 ntBASIC4.6□□□□□ -1.67
PTPN9P43378 RN7SL812P-201ENST00000493791 279 ntBASIC4.6□□□□□ -1.67
PTPN9P43378 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PTPN9P43378 AC087808.1-201ENST00000520501 361 ntBASIC4.6□□□□□ -1.67
PTPN9P43378 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms