Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH3P22223 AC106871.1-201ENST00000568324 3102 ntBASIC4.23□□□□□ -1.73
CDH3P22223 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.23□□□□□ -1.73
CDH3P22223 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH3P22223 MTND4P31-201ENST00000425607 1343 ntBASIC4.22□□□□□ -1.73
CDH3P22223 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH3P22223 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH3P22223 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH3P22223 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CDH3P22223 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CDH3P22223 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
CDH3P22223 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH3P22223 AC097504.1-201ENST00000515103 2415 ntBASIC4.22□□□□□ -1.73
CDH3P22223 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH3P22223 RNU6-353P-201ENST00000364266 108 ntBASIC4.22□□□□□ -1.73
CDH3P22223 AC068538.1-201ENST00000376856 336 ntBASIC4.22□□□□□ -1.73
CDH3P22223 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH3P22223 SNORA11F-201ENST00000408237 128 ntBASIC4.22□□□□□ -1.73
CDH3P22223 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH3P22223 RNU2-6P-201ENST00000411404 190 ntBASIC4.22□□□□□ -1.73
CDH3P22223 JKAMPP1-201ENST00000413804 919 ntBASIC4.22□□□□□ -1.73
CDH3P22223 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH3P22223 AC092832.1-201ENST00000422934 400 ntBASIC4.22□□□□□ -1.73
CDH3P22223 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH3P22223 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CDH3P22223 AL132765.1-201ENST00000434165 553 ntBASIC4.22□□□□□ -1.73
CDH3P22223 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH3P22223 AC114495.1-201ENST00000441274 436 ntBASIC4.22□□□□□ -1.73
CDH3P22223 MTCO1P53-201ENST00000441633 699 ntBASIC4.22□□□□□ -1.73
CDH3P22223 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH3P22223 AC005002.1-201ENST00000447458 540 ntBASIC4.22□□□□□ -1.73
CDH3P22223 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH3P22223 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH3P22223 RPL5P32-201ENST00000454085 879 ntBASIC4.22□□□□□ -1.73
CDH3P22223 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH3P22223 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH3P22223 AC010618.1-201ENST00000469924 477 ntBASIC4.22□□□□□ -1.73
CDH3P22223 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.22□□□□□ -1.73
CDH3P22223 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH3P22223 AC104108.1-201ENST00000509930 412 ntBASIC4.22□□□□□ -1.73
CDH3P22223 PARP4P3-201ENST00000510265 317 ntBASIC4.22□□□□□ -1.73
CDH3P22223 OR5H4P-201ENST00000510851 923 ntBASIC4.22□□□□□ -1.73
CDH3P22223 AC093752.1-206ENST00000511823 336 ntBASIC4.22□□□□□ -1.73
CDH3P22223 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH3P22223 RNA5SP446-201ENST00000515955 82 ntBASIC4.22□□□□□ -1.73
CDH3P22223 IGKV2-36-201ENST00000519999 223 ntBASIC4.22□□□□□ -1.73
CDH3P22223 OR5M7P-201ENST00000526140 972 ntBASIC4.22□□□□□ -1.73
CDH3P22223 OR4A2P-201ENST00000527276 913 ntBASIC4.22□□□□□ -1.73
CDH3P22223 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.22□□□□□ -1.73
CDH3P22223 AC087897.1-201ENST00000550134 156 ntBASIC4.22□□□□□ -1.73
CDH3P22223 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.22□□□□□ -1.73
CDH3P22223 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH3P22223 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH3P22223 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH3P22223 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CDH3P22223 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CDH3P22223 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.22□□□□□ -1.73
CDH3P22223 ATE1-AS1-202ENST00000636460 506 ntBASIC4.22□□□□□ -1.73
CDH3P22223 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
CDH3P22223 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH3P22223 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
CDH3P22223 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH3P22223 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH3P22223 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH3P22223 EIF2AP4-201ENST00000424793 1781 ntBASIC4.22□□□□□ -1.73
CDH3P22223 AC104446.1-201ENST00000613728 1321 ntBASIC4.21□□□□□ -1.73
CDH3P22223 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH3P22223 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH3P22223 RNU6-1339P-201ENST00000363574 91 ntBASIC4.21□□□□□ -1.74
CDH3P22223 RPL7P27-201ENST00000403775 720 ntBASIC4.21□□□□□ -1.74
CDH3P22223 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH3P22223 RPL23AP26-201ENST00000412728 464 ntBASIC4.21□□□□□ -1.74
CDH3P22223 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.21□□□□□ -1.74
CDH3P22223 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH3P22223 TAF13P2-201ENST00000416876 286 ntBASIC4.21□□□□□ -1.74
CDH3P22223 AC234779.1-201ENST00000425910 285 ntBASIC4.21□□□□□ -1.74
CDH3P22223 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.21□□□□□ -1.74
CDH3P22223 AC114973.1-201ENST00000429057 632 ntBASIC4.21□□□□□ -1.74
CDH3P22223 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH3P22223 HMGB1P45-201ENST00000435986 653 ntBASIC4.21□□□□□ -1.74
CDH3P22223 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH3P22223 YWHAQP9-201ENST00000445891 512 ntBASIC4.21□□□□□ -1.74
CDH3P22223 EXOSC3P1-201ENST00000448649 500 ntBASIC4.21□□□□□ -1.74
CDH3P22223 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH3P22223 TPMTP4-201ENST00000450749 678 ntBASIC4.21□□□□□ -1.74
CDH3P22223 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH3P22223 SNX5P1-201ENST00000505757 1041 ntBASIC4.21□□□□□ -1.74
CDH3P22223 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.21□□□□□ -1.74
CDH3P22223 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH3P22223 AC010460.2-201ENST00000509054 677 ntBASIC4.21□□□□□ -1.74
CDH3P22223 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH3P22223 RNU6-1028P-201ENST00000517164 93 ntBASIC4.21□□□□□ -1.74
CDH3P22223 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH3P22223 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH3P22223 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH3P22223 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH3P22223 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.21□□□□□ -1.74
CDH3P22223 OR4U1P-201ENST00000554958 912 ntBASIC4.21□□□□□ -1.74
CDH3P22223 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH3P22223 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms