Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL5A1P20908 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.36□□□□□ -1.87
COL5A1P20908 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
COL5A1P20908 ZNF603P-201ENST00000405613 487 ntBASIC3.36□□□□□ -1.87
COL5A1P20908 RNU6-233P-201ENST00000410845 141 ntBASIC3.36□□□□□ -1.87
COL5A1P20908 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.36□□□□□ -1.87
COL5A1P20908 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.36□□□□□ -1.87
COL5A1P20908 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.36□□□□□ -1.87
COL5A1P20908 AC005229.2-201ENST00000456995 399 ntBASIC3.36□□□□□ -1.87
COL5A1P20908 AC027309.2-201ENST00000520566 192 ntBASIC3.36□□□□□ -1.87
COL5A1P20908 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.36□□□□□ -1.87
COL5A1P20908 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.36□□□□□ -1.87
COL5A1P20908 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.36□□□□□ -1.87
COL5A1P20908 UBE2NP1-201ENST00000545592 458 ntBASIC3.36□□□□□ -1.87
COL5A1P20908 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.36□□□□□ -1.87
COL5A1P20908 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.36□□□□□ -1.87
COL5A1P20908 AC012078.1-201ENST00000405035 1646 ntBASIC3.36□□□□□ -1.87
COL5A1P20908 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL5A1P20908 FAM35BP-202ENST00000497389 3337 ntBASIC3.36□□□□□ -1.87
COL5A1P20908 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
COL5A1P20908 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL5A1P20908 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
COL5A1P20908 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.36□□□□□ -1.87
COL5A1P20908 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL5A1P20908 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL5A1P20908 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL5A1P20908 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL5A1P20908 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL5A1P20908 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.35□□□□□ -1.87
COL5A1P20908 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
COL5A1P20908 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL5A1P20908 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.35□□□□□ -1.87
COL5A1P20908 AC017079.2-201ENST00000416102 485 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 BX842559.1-201ENST00000419615 532 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 SAGE2P-201ENST00000420011 2126 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.35□□□□□ -1.87
COL5A1P20908 COTL1P1-201ENST00000422309 375 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 FTLP19-201ENST00000433300 394 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.35□□□□□ -1.87
COL5A1P20908 AP000926.4-201ENST00000527351 454 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.35□□□□□ -1.87
COL5A1P20908 SNORD39.4-201ENST00000620099 78 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.35□□□□□ -1.87
COL5A1P20908 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
COL5A1P20908 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.35□□□□□ -1.87
COL5A1P20908 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
COL5A1P20908 AC119744.1-201ENST00000454746 1715 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.35□□□□□ -1.87
COL5A1P20908 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
COL5A1P20908 AC123912.3-201ENST00000600907 1367 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
COL5A1P20908 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL5A1P20908 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL5A1P20908 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL5A1P20908 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.35□□□□□ -1.87
COL5A1P20908 SNORA80A-201ENST00000363922 136 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 RSL24D1P1-201ENST00000404972 493 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.35□□□□□ -1.87
COL5A1P20908 RPL6P21-201ENST00000418672 846 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 OR1AA1P-201ENST00000419597 916 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.35□□□□□ -1.87
COL5A1P20908 PTP4A1P3-201ENST00000433661 420 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 AC074367.1-201ENST00000438685 1125 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 AC000041.1-201ENST00000439655 175 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 RPS29P31-201ENST00000446147 164 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 UBE2V2P4-201ENST00000447495 259 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 AC004924.1-201ENST00000480160 781 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 HMGB3P14-201ENST00000494195 599 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 PTGES3P3-201ENST00000511479 482 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 AC023141.12-201ENST00000512399 199 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 RNA5SP341-201ENST00000516261 117 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.35□□□□□ -1.87
COL5A1P20908 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.35□□□□□ -1.87
COL5A1P20908 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.35□□□□□ -1.87
COL5A1P20908 AL451007.1-201ENST00000595491 289 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.35□□□□□ -1.87
COL5A1P20908 AL162274.2-201ENST00000614406 332 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.35□□□□□ -1.87
COL5A1P20908 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
COL5A1P20908 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
COL5A1P20908 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL5A1P20908 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.34□□□□□ -1.87
COL5A1P20908 S100A11P2-201ENST00000467589 312 ntBASIC3.34□□□□□ -1.87
COL5A1P20908 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.34□□□□□ -1.87
COL5A1P20908 RPS6P4-201ENST00000494693 758 ntBASIC3.34□□□□□ -1.87
COL5A1P20908 NARSP2-201ENST00000518524 679 ntBASIC3.34□□□□□ -1.87
COL5A1P20908 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.34□□□□□ -1.87
COL5A1P20908 AL121766.1-201ENST00000547436 487 ntBASIC3.34□□□□□ -1.87
COL5A1P20908 AC136601.2-201ENST00000604356 474 ntBASIC3.34□□□□□ -1.87
COL5A1P20908 AC124312.4-201ENST00000605533 310 ntBASIC3.34□□□□□ -1.87
COL5A1P20908 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.34□□□□□ -1.87
COL5A1P20908 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.34□□□□□ -1.87
COL5A1P20908 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL5A1P20908 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL5A1P20908 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.34□□□□□ -1.88
COL5A1P20908 AL132656.3-201ENST00000606384 1595 ntBASIC3.34□□□□□ -1.88
COL5A1P20908 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL5A1P20908 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.33□□□□□ -1.88
COL5A1P20908 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
COL5A1P20908 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms