Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.88□□□□□ -1.47
NID1P14543 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.88□□□□□ -1.47
NID1P14543 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.88□□□□□ -1.47
NID1P14543 AL137100.2-201ENST00000555786 315 ntBASIC5.88□□□□□ -1.47
NID1P14543 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.88□□□□□ -1.47
NID1P14543 NPM1P42-201ENST00000560329 862 ntBASIC5.88□□□□□ -1.47
NID1P14543 AC023968.1-201ENST00000560719 475 ntBASIC5.88□□□□□ -1.47
NID1P14543 SULT1C2P1-202ENST00000562418 459 ntBASIC5.88□□□□□ -1.47
NID1P14543 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.88□□□□□ -1.47
NID1P14543 AC113195.1-201ENST00000579952 141 ntBASIC5.88□□□□□ -1.47
NID1P14543 SNORD39.2-201ENST00000579995 76 ntBASIC5.88□□□□□ -1.47
NID1P14543 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.88□□□□□ -1.47
NID1P14543 BNIP3P16-201ENST00000589779 534 ntBASIC5.88□□□□□ -1.47
NID1P14543 AC006157.1-201ENST00000611750 366 ntBASIC5.88□□□□□ -1.47
NID1P14543 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.88□□□□□ -1.47
NID1P14543 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.88□□□□□ -1.47
NID1P14543 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.88□□□□□ -1.47
NID1P14543 AC073593.1-201ENST00000624500 411 ntBASIC5.88□□□□□ -1.47
NID1P14543 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.88□□□□□ -1.47
NID1P14543 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.88□□□□□ -1.47
NID1P14543 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 IMMTP1-201ENST00000435590 2219 ntBASIC5.88□□□□□ -1.47
NID1P14543 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NID1P14543 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 AC032011.1-201ENST00000611703 1549 ntBASIC5.88□□□□□ -1.47
NID1P14543 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.88□□□□□ -1.47
NID1P14543 AC011504.1-201ENST00000623331 4103 ntBASIC5.88□□□□□ -1.47
NID1P14543 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
NID1P14543 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NID1P14543 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.87□□□□□ -1.47
NID1P14543 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.87□□□□□ -1.47
NID1P14543 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NID1P14543 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NID1P14543 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NID1P14543 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NID1P14543 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NID1P14543 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NID1P14543 Y_RNA.252-201ENST00000364556 101 ntBASIC5.87□□□□□ -1.47
NID1P14543 SNORA19-201ENST00000384737 128 ntBASIC5.87□□□□□ -1.47
NID1P14543 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.87□□□□□ -1.47
NID1P14543 CHIAP3-201ENST00000423668 1133 ntBASIC5.87□□□□□ -1.47
NID1P14543 OR4K11P-201ENST00000431829 904 ntBASIC5.87□□□□□ -1.47
NID1P14543 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.87□□□□□ -1.47
NID1P14543 AC092967.1-201ENST00000449016 481 ntBASIC5.87□□□□□ -1.47
NID1P14543 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.87□□□□□ -1.47
NID1P14543 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.87□□□□□ -1.47
NID1P14543 AC079168.1-201ENST00000458741 345 ntBASIC5.87□□□□□ -1.47
NID1P14543 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.87□□□□□ -1.47
NID1P14543 AC018645.1-201ENST00000505003 109 ntBASIC5.87□□□□□ -1.47
NID1P14543 AC093664.1-201ENST00000511779 289 ntBASIC5.87□□□□□ -1.47
NID1P14543 Y_RNA.661-201ENST00000516003 99 ntBASIC5.87□□□□□ -1.47
NID1P14543 RNA5SP454-201ENST00000517231 127 ntBASIC5.87□□□□□ -1.47
NID1P14543 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.87□□□□□ -1.47
NID1P14543 OR4K8P-201ENST00000578842 1048 ntBASIC5.87□□□□□ -1.47
NID1P14543 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.87□□□□□ -1.47
NID1P14543 AL513327.3-201ENST00000602618 469 ntBASIC5.87□□□□□ -1.47
NID1P14543 AC016727.2-201ENST00000603988 621 ntBASIC5.87□□□□□ -1.47
NID1P14543 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.87□□□□□ -1.47
NID1P14543 AC107871.2-201ENST00000612894 502 ntBASIC5.87□□□□□ -1.47
NID1P14543 AC012409.4-201ENST00000612923 249 ntBASIC5.87□□□□□ -1.47
NID1P14543 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.87□□□□□ -1.47
NID1P14543 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NID1P14543 AC089999.3-201ENST00000622440 577 ntBASIC5.87□□□□□ -1.47
NID1P14543 AC145207.9-201ENST00000623802 325 ntBASIC5.87□□□□□ -1.47
NID1P14543 AC073592.6-201ENST00000624271 415 ntBASIC5.87□□□□□ -1.47
NID1P14543 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.87□□□□□ -1.47
NID1P14543 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.87□□□□□ -1.47
NID1P14543 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.87□□□□□ -1.47
NID1P14543 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.87□□□□□ -1.47
NID1P14543 API5P2-201ENST00000397055 1498 ntBASIC5.87□□□□□ -1.47
NID1P14543 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.87□□□□□ -1.47
NID1P14543 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NID1P14543 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.87□□□□□ -1.47
NID1P14543 CDC27P3-201ENST00000635418 1910 ntBASIC5.87□□□□□ -1.47
NID1P14543 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NID1P14543 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NID1P14543 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NID1P14543 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.87□□□□□ -1.47
NID1P14543 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.86□□□□□ -1.47
NID1P14543 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NID1P14543 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
NID1P14543 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.86□□□□□ -1.47
NID1P14543 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.86□□□□□ -1.47
NID1P14543 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NID1P14543 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
NID1P14543 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NID1P14543 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.86□□□□□ -1.47
NID1P14543 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.86□□□□□ -1.47
NID1P14543 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NID1P14543 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.86□□□□□ -1.47
NID1P14543 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NID1P14543 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.86□□□□□ -1.47
NID1P14543 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NID1P14543 AL512646.1-201ENST00000269395 1077 ntBASIC5.86□□□□□ -1.47
NID1P14543 RNU6-552P-201ENST00000362869 119 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms