Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.37□□□□□ -1.55
COL6A2P12110 HSPE1P3-201ENST00000559254 309 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.37□□□□□ -1.55
COL6A2P12110 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.37□□□□□ -1.55
COL6A2P12110 AP005403.1-201ENST00000579720 229 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.37□□□□□ -1.55
COL6A2P12110 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 RN7SL356P-201ENST00000582228 248 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 BNIP3P11-201ENST00000603878 563 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 AC010200.2-201ENST00000605098 235 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 AC023813.4-201ENST00000607580 580 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 AC080013.4-201ENST00000607624 649 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 AP000894.4-201ENST00000610185 483 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL6A2P12110 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL6A2P12110 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL6A2P12110 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL6A2P12110 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL6A2P12110 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL6A2P12110 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL6A2P12110 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
COL6A2P12110 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
COL6A2P12110 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 AC097504.1-201ENST00000515103 2415 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL6A2P12110 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL6A2P12110 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL6A2P12110 RNU6-797P-201ENST00000363101 109 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 RNY4P14-201ENST00000363656 96 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 RNU6-694P-201ENST00000364071 147 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 RNU6-533P-201ENST00000384144 107 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 SNORD115.1-201ENST00000391109 76 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AL121972.1-201ENST00000402023 252 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 PRRC2CP1-201ENST00000404428 159 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
COL6A2P12110 MIR320C1-201ENST00000408566 88 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 RNA5SP296-201ENST00000410523 111 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 GSTM3P2-201ENST00000412746 530 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AL109913.1-201ENST00000421173 514 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.36□□□□□ -1.55
COL6A2P12110 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.36□□□□□ -1.55
COL6A2P12110 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 SKP1P1-201ENST00000438081 489 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 OR7E125P-201ENST00000443450 846 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 MTND6P13-201ENST00000443510 523 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 ARPC3P5-201ENST00000448802 534 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 GAPDHP17-201ENST00000449858 1001 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AC022431.1-201ENST00000450941 438 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AL645937.3-201ENST00000453647 936 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.36□□□□□ -1.55
COL6A2P12110 AC011476.1-201ENST00000466725 307 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AC092757.1-201ENST00000467293 467 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL6A2P12110 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 HMGB1P36-201ENST00000487709 576 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 KCTD9P5-201ENST00000504141 1170 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AC117522.1-201ENST00000509821 380 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 MTND6P2-201ENST00000512226 524 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 RNA5SP271-201ENST00000516700 88 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.36□□□□□ -1.55
COL6A2P12110 TRIM77BP-201ENST00000524985 1119 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 OR5AP1P-201ENST00000529730 940 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.36□□□□□ -1.55
COL6A2P12110 AC127381.1-201ENST00000555979 939 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.36□□□□□ -1.55
COL6A2P12110 AC007448.1-201ENST00000582714 234 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 SNORD39.3-201ENST00000584451 71 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 BCRP9-201ENST00000605312 388 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AL355816.1-201ENST00000607951 118 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AC078899.5-201ENST00000612475 178 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AC006338.1-201ENST00000618453 749 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AP005431.1-201ENST00000618479 319 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.36□□□□□ -1.55
COL6A2P12110 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.36□□□□□ -1.55
COL6A2P12110 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.36□□□□□ -1.55
COL6A2P12110 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.36□□□□□ -1.55
COL6A2P12110 FARSBP1-201ENST00000435808 1778 ntBASIC5.36□□□□□ -1.55
COL6A2P12110 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
COL6A2P12110 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms