Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL11A1P12107 RMST_9.1-201ENST00000619945 193 ntBASIC3.8□□□□□ -1.8
COL11A1P12107 AC018692.3-201ENST00000623929 123 ntBASIC3.8□□□□□ -1.8
COL11A1P12107 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.8□□□□□ -1.8
COL11A1P12107 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.8□□□□□ -1.8
COL11A1P12107 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL11A1P12107 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.79□□□□□ -1.8
COL11A1P12107 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL11A1P12107 RNU1-140P-201ENST00000365040 165 ntBASIC3.79□□□□□ -1.8
COL11A1P12107 RNU6-1279P-201ENST00000383917 103 ntBASIC3.79□□□□□ -1.8
COL11A1P12107 MTND6P32-201ENST00000457611 483 ntBASIC3.79□□□□□ -1.8
COL11A1P12107 RPL23AP94-201ENST00000512518 302 ntBASIC3.79□□□□□ -1.8
COL11A1P12107 AC008885.1-201ENST00000514930 301 ntBASIC3.79□□□□□ -1.8
COL11A1P12107 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.79□□□□□ -1.8
COL11A1P12107 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.79□□□□□ -1.8
COL11A1P12107 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.79□□□□□ -1.8
COL11A1P12107 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.79□□□□□ -1.8
COL11A1P12107 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.79□□□□□ -1.8
COL11A1P12107 HMGB1P50-201ENST00000605814 607 ntBASIC3.79□□□□□ -1.8
COL11A1P12107 AC100793.4-201ENST00000613683 429 ntBASIC3.79□□□□□ -1.8
COL11A1P12107 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
COL11A1P12107 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL11A1P12107 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
COL11A1P12107 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.79□□□□□ -1.8
COL11A1P12107 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL11A1P12107 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL11A1P12107 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
COL11A1P12107 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.79□□□□□ -1.8
COL11A1P12107 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
COL11A1P12107 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL11A1P12107 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL11A1P12107 HMGN2P8-201ENST00000391458 268 ntBASIC3.79□□□□□ -1.8
COL11A1P12107 GSTA8P-201ENST00000404253 637 ntBASIC3.79□□□□□ -1.8
COL11A1P12107 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.79□□□□□ -1.8
COL11A1P12107 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL11A1P12107 RPS26P24-201ENST00000497656 331 ntBASIC3.79□□□□□ -1.8
COL11A1P12107 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL11A1P12107 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.79□□□□□ -1.8
COL11A1P12107 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.79□□□□□ -1.8
COL11A1P12107 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.79□□□□□ -1.8
COL11A1P12107 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
COL11A1P12107 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.79□□□□□ -1.8
COL11A1P12107 AL162713.1-201ENST00000604480 262 ntBASIC3.79□□□□□ -1.8
COL11A1P12107 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.79□□□□□ -1.8
COL11A1P12107 AL353684.1-201ENST00000622677 1120 ntBASIC3.79□□□□□ -1.8
COL11A1P12107 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.78□□□□□ -1.8
COL11A1P12107 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
COL11A1P12107 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
COL11A1P12107 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
COL11A1P12107 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL11A1P12107 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.78□□□□□ -1.8
COL11A1P12107 AL353705.1-201ENST00000433468 480 ntBASIC3.78□□□□□ -1.8
COL11A1P12107 AL831737.1-201ENST00000441288 271 ntBASIC3.78□□□□□ -1.8
COL11A1P12107 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.78□□□□□ -1.8
COL11A1P12107 S100A11P2-201ENST00000467589 312 ntBASIC3.78□□□□□ -1.8
COL11A1P12107 OR4R3P-201ENST00000525084 838 ntBASIC3.78□□□□□ -1.8
COL11A1P12107 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.78□□□□□ -1.8
COL11A1P12107 AC124312.4-201ENST00000605533 310 ntBASIC3.78□□□□□ -1.8
COL11A1P12107 AC110801.1-201ENST00000623590 212 ntBASIC3.78□□□□□ -1.8
COL11A1P12107 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL11A1P12107 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.78□□□□□ -1.8
COL11A1P12107 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL11A1P12107 NCAPGP1-201ENST00000505112 1814 ntBASIC3.78□□□□□ -1.8
COL11A1P12107 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
COL11A1P12107 SNORA54-201ENST00000384281 123 ntBASIC3.77□□□□□ -1.81
COL11A1P12107 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL11A1P12107 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.77□□□□□ -1.81
COL11A1P12107 TMED11P-201ENST00000479478 690 ntBASIC3.77□□□□□ -1.81
COL11A1P12107 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.77□□□□□ -1.81
COL11A1P12107 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.77□□□□□ -1.81
COL11A1P12107 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC3.77□□□□□ -1.81
COL11A1P12107 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.77□□□□□ -1.81
COL11A1P12107 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.77□□□□□ -1.81
COL11A1P12107 MIR4513-201ENST00000581077 86 ntBASIC3.77□□□□□ -1.81
COL11A1P12107 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.77□□□□□ -1.81
COL11A1P12107 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.77□□□□□ -1.81
COL11A1P12107 AL157817.1-201ENST00000614264 790 ntBASIC3.77□□□□□ -1.81
COL11A1P12107 AC006386.2-201ENST00000624491 75 ntBASIC3.77□□□□□ -1.81
COL11A1P12107 AC012005.1-201ENST00000624575 75 ntBASIC3.77□□□□□ -1.81
COL11A1P12107 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.77□□□□□ -1.81
COL11A1P12107 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
COL11A1P12107 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.77□□□□□ -1.81
COL11A1P12107 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL11A1P12107 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL11A1P12107 GCNT6-201ENST00000379591 934 ntBASIC3.77□□□□□ -1.81
COL11A1P12107 SNORD67-201ENST00000390833 111 ntBASIC3.77□□□□□ -1.81
COL11A1P12107 TAF9BP1-201ENST00000396646 746 ntBASIC3.77□□□□□ -1.81
COL11A1P12107 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL11A1P12107 AC011242.1-201ENST00000433596 1158 ntBASIC3.77□□□□□ -1.81
COL11A1P12107 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.77□□□□□ -1.81
COL11A1P12107 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
COL11A1P12107 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.77□□□□□ -1.81
COL11A1P12107 NARSP2-201ENST00000518524 679 ntBASIC3.77□□□□□ -1.81
COL11A1P12107 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL11A1P12107 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.77□□□□□ -1.81
COL11A1P12107 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.77□□□□□ -1.81
COL11A1P12107 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.77□□□□□ -1.81
COL11A1P12107 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.77□□□□□ -1.81
COL11A1P12107 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL11A1P12107 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms