Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNRPA1P09661 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SNRPA1P09661 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SNRPA1P09661 METTL21EP-201ENST00000298105 713 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 ENSAP3-201ENST00000312710 333 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SNRPA1P09661 RNU1-94P-201ENST00000362627 173 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 RNA5SP307-201ENST00000362863 116 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNRPA1P09661 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNRPA1P09661 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.56□□□□□ -1.52
SNRPA1P09661 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.56□□□□□ -1.52
SNRPA1P09661 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.56□□□□□ -1.52
SNRPA1P09661 USP9YP14-201ENST00000430663 563 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 AC010153.1-201ENST00000432862 727 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 AC234064.1-201ENST00000436312 247 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 MTCO2P16-201ENST00000436962 677 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 MUPP-201ENST00000438111 566 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 AL353093.1-201ENST00000441292 436 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.56□□□□□ -1.52
SNRPA1P09661 MTCO3P16-201ENST00000454456 754 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.56□□□□□ -1.52
SNRPA1P09661 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.56□□□□□ -1.52
SNRPA1P09661 AC011979.1-201ENST00000472300 483 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 SYPL1P1-201ENST00000473622 768 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 AC091959.2-201ENST00000477363 321 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.56□□□□□ -1.52
SNRPA1P09661 AC021146.8-201ENST00000507455 733 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 AL592156.1-201ENST00000508758 304 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 RPS27AP18-201ENST00000515536 459 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 RNA5SP519-201ENST00000516480 119 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.56□□□□□ -1.52
SNRPA1P09661 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.56□□□□□ -1.52
SNRPA1P09661 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.56□□□□□ -1.52
SNRPA1P09661 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.56□□□□□ -1.52
SNRPA1P09661 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.56□□□□□ -1.52
SNRPA1P09661 AC024909.2-201ENST00000553035 286 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.56□□□□□ -1.52
SNRPA1P09661 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.56□□□□□ -1.52
SNRPA1P09661 AL590229.1-201ENST00000603497 542 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.56□□□□□ -1.52
SNRPA1P09661 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNRPA1P09661 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNRPA1P09661 AC007342.8-201ENST00000623278 678 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 FP325313.1-201ENST00000638228 703 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SNRPA1P09661 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.56□□□□□ -1.52
SNRPA1P09661 AC026523.2-201ENST00000625039 7739 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNRPA1P09661 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNRPA1P09661 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.56□□□□□ -1.52
SNRPA1P09661 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.56□□□□□ -1.52
SNRPA1P09661 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SNRPA1P09661 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNRPA1P09661 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNRPA1P09661 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.56□□□□□ -1.52
SNRPA1P09661 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.56□□□□□ -1.52
SNRPA1P09661 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SNRPA1P09661 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNRPA1P09661 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
SNRPA1P09661 ZNF542P-204ENST00000482727 1305 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 AC104260.2-201ENST00000623551 3497 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 AC000374.1-201ENST00000434698 1745 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.55□□□□□ -1.52
SNRPA1P09661 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SNRPA1P09661 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SNRPA1P09661 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.55□□□□□ -1.52
SNRPA1P09661 AL590084.2-201ENST00000401481 382 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 AP000357.1-201ENST00000409926 1165 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 RNA5SP36-201ENST00000410197 133 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 EIF4A1P3-201ENST00000411521 244 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.55□□□□□ -1.52
SNRPA1P09661 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.55□□□□□ -1.52
SNRPA1P09661 OR5AW1P-201ENST00000426334 1006 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 DPY19L1P2-201ENST00000426647 915 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 HMGN2P27-201ENST00000427352 270 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.55□□□□□ -1.52
SNRPA1P09661 MTCO1P52-201ENST00000433928 531 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.55□□□□□ -1.52
SNRPA1P09661 RPS26P30-201ENST00000443431 335 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.55□□□□□ -1.52
SNRPA1P09661 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.55□□□□□ -1.52
SNRPA1P09661 LINC00888-204ENST00000487386 421 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.55□□□□□ -1.52
SNRPA1P09661 AC080014.1-201ENST00000496877 1201 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.55□□□□□ -1.52
SNRPA1P09661 KCTD9P2-201ENST00000512203 1013 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 RNA5SP73-201ENST00000516744 108 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SNRPA1P09661 AC083923.1-201ENST00000523708 376 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.55□□□□□ -1.52
SNRPA1P09661 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.55□□□□□ -1.52
SNRPA1P09661 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.55□□□□□ -1.52
SNRPA1P09661 AC044913.1-201ENST00000557200 430 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.55□□□□□ -1.52
SNRPA1P09661 AC106785.1-201ENST00000565935 262 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNRPA1P09661 AC002400.1-201ENST00000569310 726 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms