Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.96□□□□□ -1.78
RETP07949 AC115621.1-201ENST00000604653 858 ntBASIC3.96□□□□□ -1.78
RETP07949 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.96□□□□□ -1.78
RETP07949 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.96□□□□□ -1.78
RETP07949 AP005264.7-201ENST00000625003 745 ntBASIC3.96□□□□□ -1.78
RETP07949 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RETP07949 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RETP07949 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RETP07949 FAM35DP-201ENST00000323387 2712 ntBASIC3.96□□□□□ -1.78
RETP07949 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RETP07949 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RETP07949 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
RETP07949 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.96□□□□□ -1.78
RETP07949 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RETP07949 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RETP07949 RNU6-618P-201ENST00000363518 112 ntBASIC3.95□□□□□ -1.78
RETP07949 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RETP07949 AL034403.1-201ENST00000399414 885 ntBASIC3.95□□□□□ -1.78
RETP07949 UBE2V2P3-201ENST00000433562 437 ntBASIC3.95□□□□□ -1.78
RETP07949 Z85994.2-201ENST00000434327 452 ntBASIC3.95□□□□□ -1.78
RETP07949 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.95□□□□□ -1.78
RETP07949 RPS11P1-201ENST00000451072 473 ntBASIC3.95□□□□□ -1.78
RETP07949 CEACAMP4-201ENST00000457676 421 ntBASIC3.95□□□□□ -1.78
RETP07949 RNU6-1218P-201ENST00000458990 108 ntBASIC3.95□□□□□ -1.78
RETP07949 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.95□□□□□ -1.78
RETP07949 RPL23AP71-201ENST00000470966 469 ntBASIC3.95□□□□□ -1.78
RETP07949 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.95□□□□□ -1.78
RETP07949 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.95□□□□□ -1.78
RETP07949 RPL7P47-201ENST00000497299 556 ntBASIC3.95□□□□□ -1.78
RETP07949 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.95□□□□□ -1.78
RETP07949 AC104619.4-201ENST00000510773 249 ntBASIC3.95□□□□□ -1.78
RETP07949 RNA5SP179-201ENST00000517284 121 ntBASIC3.95□□□□□ -1.78
RETP07949 SEC11B-201ENST00000518383 499 ntBASIC3.95□□□□□ -1.78
RETP07949 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.95□□□□□ -1.78
RETP07949 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.95□□□□□ -1.78
RETP07949 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.95□□□□□ -1.78
RETP07949 AC106782.4-201ENST00000568264 210 ntBASIC3.95□□□□□ -1.78
RETP07949 AC141257.3-201ENST00000572906 215 ntBASIC3.95□□□□□ -1.78
RETP07949 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.95□□□□□ -1.78
RETP07949 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.95□□□□□ -1.78
RETP07949 AC079791.1-201ENST00000605356 973 ntBASIC3.95□□□□□ -1.78
RETP07949 HMGB1P50-201ENST00000605814 607 ntBASIC3.95□□□□□ -1.78
RETP07949 AC034236.3-201ENST00000605999 461 ntBASIC3.95□□□□□ -1.78
RETP07949 AP003392.5-201ENST00000607857 415 ntBASIC3.95□□□□□ -1.78
RETP07949 AC128687.2-201ENST00000609657 566 ntBASIC3.95□□□□□ -1.78
RETP07949 AL590410.1-201ENST00000617925 333 ntBASIC3.95□□□□□ -1.78
RETP07949 AC025125.1-201ENST00000624743 1922 ntBASIC3.95□□□□□ -1.78
RETP07949 USP8P1-201ENST00000494673 3183 ntBASIC3.95□□□□□ -1.78
RETP07949 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RETP07949 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RETP07949 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RETP07949 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.94□□□□□ -1.78
RETP07949 RNU4-23P-201ENST00000362839 140 ntBASIC3.94□□□□□ -1.78
RETP07949 RNU6-328P-201ENST00000390887 106 ntBASIC3.94□□□□□ -1.78
RETP07949 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RETP07949 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RETP07949 Z97055.1-201ENST00000419730 712 ntBASIC3.94□□□□□ -1.78
RETP07949 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RETP07949 AL591419.1-201ENST00000427423 339 ntBASIC3.94□□□□□ -1.78
RETP07949 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.94□□□□□ -1.78
RETP07949 ATP5HP2-201ENST00000433885 485 ntBASIC3.94□□□□□ -1.78
RETP07949 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RETP07949 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.94□□□□□ -1.78
RETP07949 MTND2P25-201ENST00000449028 610 ntBASIC3.94□□□□□ -1.78
RETP07949 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.94□□□□□ -1.78
RETP07949 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.94□□□□□ -1.78
RETP07949 CALM1P2-201ENST00000452941 448 ntBASIC3.94□□□□□ -1.78
RETP07949 AL133162.1-201ENST00000463228 453 ntBASIC3.94□□□□□ -1.78
RETP07949 RNU6-551P-201ENST00000516661 103 ntBASIC3.94□□□□□ -1.78
RETP07949 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.94□□□□□ -1.78
RETP07949 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.94□□□□□ -1.78
RETP07949 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.94□□□□□ -1.78
RETP07949 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.94□□□□□ -1.78
RETP07949 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.94□□□□□ -1.78
RETP07949 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.94□□□□□ -1.78
RETP07949 NPM1P35-201ENST00000533043 868 ntBASIC3.94□□□□□ -1.78
RETP07949 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.94□□□□□ -1.78
RETP07949 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.94□□□□□ -1.78
RETP07949 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.94□□□□□ -1.78
RETP07949 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.94□□□□□ -1.78
RETP07949 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.94□□□□□ -1.78
RETP07949 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.94□□□□□ -1.78
RETP07949 AC019131.2-201ENST00000609071 870 ntBASIC3.94□□□□□ -1.78
RETP07949 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.94□□□□□ -1.78
RETP07949 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.94□□□□□ -1.78
RETP07949 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RETP07949 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
RETP07949 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RETP07949 PRO1804-201ENST00000623780 2050 ntBASIC3.93□□□□□ -1.78
RETP07949 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RETP07949 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
RETP07949 BDP1P-201ENST00000582658 1990 ntBASIC3.93□□□□□ -1.78
RETP07949 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RETP07949 Z98941.1-201ENST00000407764 100 ntBASIC3.93□□□□□ -1.78
RETP07949 AC096664.2-201ENST00000411843 406 ntBASIC3.93□□□□□ -1.78
RETP07949 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.93□□□□□ -1.78
RETP07949 AC245052.5-201ENST00000416320 649 ntBASIC3.93□□□□□ -1.78
RETP07949 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.93□□□□□ -1.78
RETP07949 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.93□□□□□ -1.78
RETP07949 AL158156.1-201ENST00000422509 473 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms