Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.32□□□□□ -1.72
COL2A1P02458 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.32□□□□□ -1.72
COL2A1P02458 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL2A1P02458 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.32□□□□□ -1.72
COL2A1P02458 MFSD8-213ENST00000641134 1327 ntBASIC4.32□□□□□ -1.72
COL2A1P02458 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL2A1P02458 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL2A1P02458 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL2A1P02458 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.31□□□□□ -1.72
COL2A1P02458 RHOT1P2-201ENST00000366423 333 ntBASIC4.31□□□□□ -1.72
COL2A1P02458 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.31□□□□□ -1.72
COL2A1P02458 ELOCP18-201ENST00000434209 337 ntBASIC4.31□□□□□ -1.72
COL2A1P02458 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.31□□□□□ -1.72
COL2A1P02458 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.31□□□□□ -1.72
COL2A1P02458 EIF2S2P4-201ENST00000461070 984 ntBASIC4.31□□□□□ -1.72
COL2A1P02458 MTND6P6-201ENST00000478031 263 ntBASIC4.31□□□□□ -1.72
COL2A1P02458 AC025445.1-201ENST00000502728 300 ntBASIC4.31□□□□□ -1.72
COL2A1P02458 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.31□□□□□ -1.72
COL2A1P02458 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.31□□□□□ -1.72
COL2A1P02458 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.31□□□□□ -1.72
COL2A1P02458 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.31□□□□□ -1.72
COL2A1P02458 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL2A1P02458 SULT1C2P2-201ENST00000562517 294 ntBASIC4.31□□□□□ -1.72
COL2A1P02458 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.31□□□□□ -1.72
COL2A1P02458 AC090116.1-201ENST00000615679 446 ntBASIC4.31□□□□□ -1.72
COL2A1P02458 MIR8057-201ENST00000620957 69 ntBASIC4.31□□□□□ -1.72
COL2A1P02458 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.31□□□□□ -1.72
COL2A1P02458 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL2A1P02458 MTND5P31-201ENST00000419366 1374 ntBASIC4.31□□□□□ -1.72
COL2A1P02458 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.31□□□□□ -1.72
COL2A1P02458 MFSD8-233ENST00000641482 4860 ntBASIC4.31□□□□□ -1.72
COL2A1P02458 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.31□□□□□ -1.72
COL2A1P02458 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COL2A1P02458 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL2A1P02458 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.31□□□□□ -1.72
COL2A1P02458 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL2A1P02458 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.31□□□□□ -1.72
COL2A1P02458 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.31□□□□□ -1.72
COL2A1P02458 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
COL2A1P02458 MIR490-201ENST00000384865 128 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 NPM1P38-201ENST00000403835 865 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 UBE2V1P15-201ENST00000407776 448 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 PTGES3P2-201ENST00000407942 482 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.3□□□□□ -1.72
COL2A1P02458 MORF4L1P7-201ENST00000426038 703 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.3□□□□□ -1.72
COL2A1P02458 ELOCP13-201ENST00000443934 329 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
COL2A1P02458 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.3□□□□□ -1.72
COL2A1P02458 RPS4XP10-201ENST00000465034 731 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 RPS27AP1-201ENST00000475545 471 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 MTND3P24-201ENST00000506306 329 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AC026784.1-201ENST00000507986 352 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 RNA5SP154-201ENST00000516193 111 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 OR8K4P-201ENST00000534608 872 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.3□□□□□ -1.72
COL2A1P02458 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.3□□□□□ -1.72
COL2A1P02458 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.3□□□□□ -1.72
COL2A1P02458 AC093510.2-201ENST00000562820 896 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 MIR4433B-201ENST00000581329 102 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.3□□□□□ -1.72
COL2A1P02458 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.3□□□□□ -1.72
COL2A1P02458 AC010591.1-201ENST00000603941 649 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AP003392.5-201ENST00000607857 415 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AL121652.1-201ENST00000608851 448 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.3□□□□□ -1.72
COL2A1P02458 AL355365.1-201ENST00000616480 294 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AC019226.2-201ENST00000625973 424 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL2A1P02458 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL2A1P02458 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.3□□□□□ -1.72
COL2A1P02458 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.3□□□□□ -1.72
COL2A1P02458 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL2A1P02458 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL2A1P02458 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL2A1P02458 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL2A1P02458 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
COL2A1P02458 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.3□□□□□ -1.72
COL2A1P02458 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL2A1P02458 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
COL2A1P02458 HMGB3P20-201ENST00000417997 600 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 MTND2P16-201ENST00000419987 799 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AL391219.1-201ENST00000422570 483 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 CR848007.2-201ENST00000424918 787 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 MTCO2P23-201ENST00000425216 680 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 DPY19L1P2-201ENST00000426647 915 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.3□□□□□ -1.72
COL2A1P02458 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.3□□□□□ -1.72
COL2A1P02458 SNORA70.18-201ENST00000516696 98 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 RN7SKP209-201ENST00000516888 304 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.3□□□□□ -1.72
COL2A1P02458 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.3□□□□□ -1.72
COL2A1P02458 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.3□□□□□ -1.72
COL2A1P02458 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.3□□□□□ -1.72
COL2A1P02458 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.3□□□□□ -1.72
COL2A1P02458 AC087888.1-201ENST00000550884 1254 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.3□□□□□ -1.72
COL2A1P02458 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.3□□□□□ -1.72
COL2A1P02458 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms