Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SMC4P1-201ENST00000414479 527 ntBASIC1.5□□□□□ -2.17
USH2AO75445 EEF1A1P41-201ENST00000414667 207 ntBASIC1.5□□□□□ -2.17
USH2AO75445 RN7SKP210-201ENST00000459176 261 ntBASIC1.5□□□□□ -2.17
USH2AO75445 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.5□□□□□ -2.17
USH2AO75445 RNA5SP367-201ENST00000516557 118 ntBASIC1.5□□□□□ -2.17
USH2AO75445 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC1.5□□□□□ -2.17
USH2AO75445 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.5□□□□□ -2.17
USH2AO75445 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 AL162713.1-201ENST00000604480 262 ntBASIC1.5□□□□□ -2.17
USH2AO75445 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.5□□□□□ -2.17
USH2AO75445 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC1.5□□□□□ -2.17
USH2AO75445 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC1.5□□□□□ -2.17
USH2AO75445 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
USH2AO75445 BCLAF1P1-201ENST00000505813 2752 ntBASIC1.5□□□□□ -2.17
USH2AO75445 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC1.5□□□□□ -2.17
USH2AO75445 Y_RNA.374-201ENST00000365606 101 ntBASIC1.5□□□□□ -2.17
USH2AO75445 AL356057.1-202ENST00000402263 756 ntBASIC1.5□□□□□ -2.17
USH2AO75445 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC1.5□□□□□ -2.17
USH2AO75445 AC104687.1-201ENST00000485829 412 ntBASIC1.5□□□□□ -2.17
USH2AO75445 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 PSMA2P1-201ENST00000526365 646 ntBASIC1.5□□□□□ -2.17
USH2AO75445 AC018552.3-201ENST00000567416 561 ntBASIC1.5□□□□□ -2.17
USH2AO75445 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC1.5□□□□□ -2.17
USH2AO75445 AC005242.1-201ENST00000585658 438 ntBASIC1.5□□□□□ -2.17
USH2AO75445 MKKS-203ENST00000609375 882 ntTSL 2 BASIC1.5□□□□□ -2.17
USH2AO75445 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC1.5□□□□□ -2.17
USH2AO75445 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC1.49□□□□□ -2.17
USH2AO75445 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
USH2AO75445 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
USH2AO75445 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 U3.12-201ENST00000364498 214 ntBASIC1.49□□□□□ -2.17
USH2AO75445 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC1.49□□□□□ -2.17
USH2AO75445 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
USH2AO75445 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
USH2AO75445 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC1.49□□□□□ -2.17
USH2AO75445 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.49□□□□□ -2.17
USH2AO75445 IGLV3-26-201ENST00000520756 302 ntBASIC1.49□□□□□ -2.17
USH2AO75445 NELL2-211ENST00000548826 559 ntTSL 2 BASIC1.49□□□□□ -2.17
USH2AO75445 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC1.49□□□□□ -2.17
USH2AO75445 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC1.49□□□□□ -2.17
USH2AO75445 AL359535.1-201ENST00000612100 1087 ntBASIC1.49□□□□□ -2.17
USH2AO75445 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.49□□□□□ -2.17
USH2AO75445 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC1.49□□□□□ -2.17
USH2AO75445 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 IDE-202ENST00000371581 4480 ntTSL 2 BASIC1.49□□□□□ -2.17
USH2AO75445 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC1.49□□□□□ -2.17
USH2AO75445 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC1.49□□□□□ -2.17
USH2AO75445 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC1.49□□□□□ -2.17
USH2AO75445 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 AC011742.1-201ENST00000431448 434 ntBASIC1.49□□□□□ -2.17
USH2AO75445 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 MAPK6PS3-201ENST00000403865 2162 ntBASIC1.49□□□□□ -2.17
USH2AO75445 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC1.49□□□□□ -2.17
USH2AO75445 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.49□□□□□ -2.17
USH2AO75445 AL590084.1-201ENST00000407885 387 ntBASIC1.49□□□□□ -2.17
USH2AO75445 U3.39-201ENST00000408569 239 ntBASIC1.49□□□□□ -2.17
USH2AO75445 AC007899.1-201ENST00000412776 775 ntBASIC1.49□□□□□ -2.17
USH2AO75445 AC004552.1-201ENST00000419089 348 ntBASIC1.49□□□□□ -2.17
USH2AO75445 HIGD1AP12-201ENST00000427832 281 ntBASIC1.49□□□□□ -2.17
USH2AO75445 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC1.49□□□□□ -2.17
USH2AO75445 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.49□□□□□ -2.17
USH2AO75445 MIR4498-201ENST00000577599 66 ntBASIC1.49□□□□□ -2.17
USH2AO75445 AC105227.2-201ENST00000615075 605 ntBASIC1.49□□□□□ -2.17
USH2AO75445 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC1.49□□□□□ -2.17
USH2AO75445 HMGN2P23-201ENST00000456759 269 ntBASIC1.49□□□□□ -2.17
USH2AO75445 AC112184.1-201ENST00000505179 312 ntBASIC1.49□□□□□ -2.17
USH2AO75445 AL022393.1-201ENST00000625142 1677 ntBASIC1.49□□□□□ -2.17
USH2AO75445 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH2AO75445 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
USH2AO75445 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.48□□□□□ -2.17
USH2AO75445 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC1.48□□□□□ -2.17
USH2AO75445 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC1.48□□□□□ -2.17
USH2AO75445 AL691447.1-201ENST00000419456 387 ntBASIC1.48□□□□□ -2.17
USH2AO75445 RPL23AP89-201ENST00000439324 255 ntBASIC1.48□□□□□ -2.17
USH2AO75445 RPS4XP2-201ENST00000458402 793 ntBASIC1.48□□□□□ -2.17
USH2AO75445 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.48□□□□□ -2.17
USH2AO75445 AC114781.4-201ENST00000513707 639 ntBASIC1.48□□□□□ -2.17
USH2AO75445 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms