Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.4□□□□□ -1.86
SGCEO43556 USP8P1-201ENST00000494673 3183 ntBASIC3.4□□□□□ -1.86
SGCEO43556 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SGCEO43556 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.4□□□□□ -1.87
SGCEO43556 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SGCEO43556 SNORA70.2-201ENST00000364506 135 ntBASIC3.4□□□□□ -1.87
SGCEO43556 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SGCEO43556 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.4□□□□□ -1.87
SGCEO43556 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
SGCEO43556 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SGCEO43556 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.4□□□□□ -1.87
SGCEO43556 RNU1-13P-201ENST00000384499 162 ntBASIC3.4□□□□□ -1.87
SGCEO43556 AL590704.1-201ENST00000402856 794 ntBASIC3.4□□□□□ -1.87
SGCEO43556 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.4□□□□□ -1.87
SGCEO43556 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.4□□□□□ -1.87
SGCEO43556 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SGCEO43556 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.4□□□□□ -1.87
SGCEO43556 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.4□□□□□ -1.87
SGCEO43556 RPL12P26-201ENST00000452430 487 ntBASIC3.4□□□□□ -1.87
SGCEO43556 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.4□□□□□ -1.87
SGCEO43556 RPS20P32-201ENST00000456044 356 ntBASIC3.4□□□□□ -1.87
SGCEO43556 AC010307.1-201ENST00000467206 836 ntBASIC3.4□□□□□ -1.87
SGCEO43556 AC146507.1-201ENST00000468335 354 ntBASIC3.4□□□□□ -1.87
SGCEO43556 RPS4XP15-201ENST00000489210 795 ntBASIC3.4□□□□□ -1.87
SGCEO43556 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.4□□□□□ -1.87
SGCEO43556 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.4□□□□□ -1.87
SGCEO43556 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.4□□□□□ -1.87
SGCEO43556 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.4□□□□□ -1.87
SGCEO43556 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.4□□□□□ -1.87
SGCEO43556 MTCO3P42-201ENST00000509488 518 ntBASIC3.4□□□□□ -1.87
SGCEO43556 MTCO3P39-201ENST00000514812 518 ntBASIC3.4□□□□□ -1.87
SGCEO43556 MIR2116-201ENST00000517221 80 ntBASIC3.4□□□□□ -1.87
SGCEO43556 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SGCEO43556 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.4□□□□□ -1.87
SGCEO43556 AP002812.4-201ENST00000532139 286 ntBASIC3.4□□□□□ -1.87
SGCEO43556 AP004242.1-201ENST00000533701 349 ntBASIC3.4□□□□□ -1.87
SGCEO43556 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.4□□□□□ -1.87
SGCEO43556 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
SGCEO43556 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.4□□□□□ -1.87
SGCEO43556 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.4□□□□□ -1.87
SGCEO43556 CENPUP2-201ENST00000555897 1186 ntBASIC3.4□□□□□ -1.87
SGCEO43556 PARP1P2-201ENST00000556806 195 ntBASIC3.4□□□□□ -1.87
SGCEO43556 AL845331.3-202ENST00000562856 261 ntBASIC3.4□□□□□ -1.87
SGCEO43556 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.4□□□□□ -1.87
SGCEO43556 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.4□□□□□ -1.87
SGCEO43556 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.4□□□□□ -1.87
SGCEO43556 AL450489.1-201ENST00000612071 468 ntBASIC3.4□□□□□ -1.87
SGCEO43556 AC107905.1-201ENST00000616204 426 ntBASIC3.4□□□□□ -1.87
SGCEO43556 AC121761.2-201ENST00000617300 689 ntBASIC3.4□□□□□ -1.87
SGCEO43556 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.4□□□□□ -1.87
SGCEO43556 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.4□□□□□ -1.87
SGCEO43556 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.4□□□□□ -1.87
SGCEO43556 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.4□□□□□ -1.87
SGCEO43556 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SGCEO43556 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SGCEO43556 AP001148.1-201ENST00000624124 2359 ntBASIC3.39□□□□□ -1.87
SGCEO43556 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SGCEO43556 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SGCEO43556 LINC00561-201ENST00000565815 2738 ntBASIC3.39□□□□□ -1.87
SGCEO43556 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SGCEO43556 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.39□□□□□ -1.87
SGCEO43556 RNA5SP443-201ENST00000363083 132 ntBASIC3.39□□□□□ -1.87
SGCEO43556 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.39□□□□□ -1.87
SGCEO43556 RNU6-452P-201ENST00000384406 107 ntBASIC3.39□□□□□ -1.87
SGCEO43556 SNORA70E-201ENST00000384492 135 ntBASIC3.39□□□□□ -1.87
SGCEO43556 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SGCEO43556 RNU6-564P-201ENST00000410983 104 ntBASIC3.39□□□□□ -1.87
SGCEO43556 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SGCEO43556 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.39□□□□□ -1.87
SGCEO43556 AC007390.1-201ENST00000415722 356 ntBASIC3.39□□□□□ -1.87
SGCEO43556 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.39□□□□□ -1.87
SGCEO43556 RSL24D1P6-201ENST00000426934 401 ntBASIC3.39□□□□□ -1.87
SGCEO43556 RPS27AP12-201ENST00000429552 465 ntBASIC3.39□□□□□ -1.87
SGCEO43556 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.39□□□□□ -1.87
SGCEO43556 HSFY6P-201ENST00000445573 403 ntBASIC3.39□□□□□ -1.87
SGCEO43556 HMGN2P21-201ENST00000447764 270 ntBASIC3.39□□□□□ -1.87
SGCEO43556 RN7SL385P-201ENST00000468873 276 ntBASIC3.39□□□□□ -1.87
SGCEO43556 AC092451.1-201ENST00000480211 153 ntBASIC3.39□□□□□ -1.87
SGCEO43556 AL035404.1-201ENST00000497982 568 ntBASIC3.39□□□□□ -1.87
SGCEO43556 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.39□□□□□ -1.87
SGCEO43556 AC026784.1-201ENST00000507986 352 ntBASIC3.39□□□□□ -1.87
SGCEO43556 PTGES3P3-201ENST00000511479 482 ntBASIC3.39□□□□□ -1.87
SGCEO43556 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.39□□□□□ -1.87
SGCEO43556 RNU6-491P-201ENST00000516099 110 ntBASIC3.39□□□□□ -1.87
SGCEO43556 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.39□□□□□ -1.87
SGCEO43556 NDUFA5P2-201ENST00000519723 344 ntBASIC3.39□□□□□ -1.87
SGCEO43556 IGKV2-36-201ENST00000519999 223 ntBASIC3.39□□□□□ -1.87
SGCEO43556 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.39□□□□□ -1.87
SGCEO43556 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SGCEO43556 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.39□□□□□ -1.87
SGCEO43556 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.39□□□□□ -1.87
SGCEO43556 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.39□□□□□ -1.87
SGCEO43556 AC025260.1-201ENST00000548858 430 ntBASIC3.39□□□□□ -1.87
SGCEO43556 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.39□□□□□ -1.87
SGCEO43556 AGGF1P6-201ENST00000569213 976 ntBASIC3.39□□□□□ -1.87
SGCEO43556 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.39□□□□□ -1.87
SGCEO43556 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.39□□□□□ -1.87
SGCEO43556 ZNF92P3-201ENST00000596594 954 ntBASIC3.39□□□□□ -1.87
SGCEO43556 EIF1P6-201ENST00000600054 334 ntBASIC3.39□□□□□ -1.87
SGCEO43556 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms