Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.56□□□□□ -1.68
SMAD6O43541 RPL34P26-201ENST00000445636 354 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SMAD6O43541 AC012671.1-201ENST00000451912 203 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 VN1R32P-201ENST00000452234 905 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.56□□□□□ -1.68
SMAD6O43541 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.56□□□□□ -1.68
SMAD6O43541 AC011276.1-201ENST00000469688 323 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 AC108751.2-201ENST00000469993 231 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.56□□□□□ -1.68
SMAD6O43541 AC083829.1-201ENST00000503756 657 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.56□□□□□ -1.68
SMAD6O43541 MTCO2P32-201ENST00000514865 403 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 RNU6-347P-201ENST00000516658 105 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 RNU6-759P-201ENST00000516740 103 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.56□□□□□ -1.68
SMAD6O43541 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.56□□□□□ -1.68
SMAD6O43541 DEFB109D-201ENST00000529497 240 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 PDCL2P2-201ENST00000533651 189 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.56□□□□□ -1.68
SMAD6O43541 AC007115.1-201ENST00000546853 234 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.56□□□□□ -1.68
SMAD6O43541 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.56□□□□□ -1.68
SMAD6O43541 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.56□□□□□ -1.68
SMAD6O43541 AL021997.1-201ENST00000605757 193 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.56□□□□□ -1.68
SMAD6O43541 AC013468.1-201ENST00000608680 598 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 AC005332.10-201ENST00000612725 619 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.56□□□□□ -1.68
SMAD6O43541 AL133370.2-201ENST00000619934 439 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 AC091931.1-201ENST00000623488 728 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 AC092159.4-201ENST00000624944 550 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.56□□□□□ -1.68
SMAD6O43541 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.56□□□□□ -1.68
SMAD6O43541 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.56□□□□□ -1.68
SMAD6O43541 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMAD6O43541 AP001273.1-201ENST00000624493 3152 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMAD6O43541 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMAD6O43541 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SMAD6O43541 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
SMAD6O43541 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMAD6O43541 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMAD6O43541 AL390237.1-201ENST00000404226 1415 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMAD6O43541 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMAD6O43541 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.55□□□□□ -1.68
SMAD6O43541 ANKRD36P1-201ENST00000344424 659 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 RPL32P3-201ENST00000359025 275 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SMAD6O43541 RNA5SP151-201ENST00000365632 117 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.55□□□□□ -1.68
SMAD6O43541 RNU6-1279P-201ENST00000383917 103 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 AF274854.1-201ENST00000413236 615 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.55□□□□□ -1.68
SMAD6O43541 CHIAP3-201ENST00000423668 1133 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 NIPA2P1-201ENST00000426223 976 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.55□□□□□ -1.68
SMAD6O43541 C4BPAP2-201ENST00000428434 478 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 IFNNP1-201ENST00000429219 553 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.55□□□□□ -1.68
SMAD6O43541 AC098826.1-201ENST00000433943 471 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.55□□□□□ -1.68
SMAD6O43541 ELOCP8-201ENST00000439309 332 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.55□□□□□ -1.68
SMAD6O43541 CBX1P1-201ENST00000440184 427 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 MTND2P20-201ENST00000440805 661 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 ELOCP15-201ENST00000442090 332 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SMAD6O43541 SEPT14P24-201ENST00000447236 180 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 AC239809.1-201ENST00000450470 217 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 NDUFS5P3-201ENST00000450668 321 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 AC244505.3-201ENST00000454598 187 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 RPL23AP24-201ENST00000458203 385 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.55□□□□□ -1.68
SMAD6O43541 AC053481.1-201ENST00000467217 306 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 RPL23AP37-201ENST00000479658 549 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 AC109927.2-201ENST00000506416 303 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.55□□□□□ -1.68
SMAD6O43541 RNU6-232P-201ENST00000517144 64 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.55□□□□□ -1.68
SMAD6O43541 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.55□□□□□ -1.68
SMAD6O43541 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SMAD6O43541 AC010546.1-201ENST00000569391 485 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 MIR4284-201ENST00000578924 81 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.55□□□□□ -1.68
SMAD6O43541 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
SMAD6O43541 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.55□□□□□ -1.68
SMAD6O43541 BPIFA4P-203ENST00000603168 689 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 AP000811.1-201ENST00000603803 651 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 AC090948.1-201ENST00000607464 549 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 AC009237.15-201ENST00000610252 501 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 MIR6891-201ENST00000618788 93 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 AL157770.1-201ENST00000623049 439 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 AC079248.2-201ENST00000623779 326 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.55□□□□□ -1.68
SMAD6O43541 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms