Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.95□□□□□ -1.94
SDCBPO00560 UBE2CP3-201ENST00000502715 450 ntBASIC2.95□□□□□ -1.94
SDCBPO00560 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.95□□□□□ -1.94
SDCBPO00560 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.95□□□□□ -1.94
SDCBPO00560 SNORD116-26-201ENST00000516006 96 ntBASIC2.95□□□□□ -1.94
SDCBPO00560 RNA5SP309-201ENST00000516670 106 ntBASIC2.95□□□□□ -1.94
SDCBPO00560 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.95□□□□□ -1.94
SDCBPO00560 AP001636.2-201ENST00000525517 696 ntBASIC2.95□□□□□ -1.94
SDCBPO00560 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.95□□□□□ -1.94
SDCBPO00560 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SDCBPO00560 AC008507.1-201ENST00000587506 734 ntBASIC2.95□□□□□ -1.94
SDCBPO00560 AC010857.1-201ENST00000606398 594 ntBASIC2.95□□□□□ -1.94
SDCBPO00560 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.95□□□□□ -1.94
SDCBPO00560 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SDCBPO00560 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SDCBPO00560 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.95□□□□□ -1.94
SDCBPO00560 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
SDCBPO00560 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.95□□□□□ -1.94
SDCBPO00560 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SDCBPO00560 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.95□□□□□ -1.94
SDCBPO00560 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.95□□□□□ -1.94
SDCBPO00560 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SDCBPO00560 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SDCBPO00560 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SDCBPO00560 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SDCBPO00560 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SDCBPO00560 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SDCBPO00560 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SDCBPO00560 RNU1-75P-201ENST00000347264 129 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 SNORD3H-201ENST00000384486 214 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.94□□□□□ -1.94
SDCBPO00560 RANP4-201ENST00000413361 655 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 RPS7P13-201ENST00000413955 498 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.94□□□□□ -1.94
SDCBPO00560 AC073464.3-201ENST00000422564 712 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.94□□□□□ -1.94
SDCBPO00560 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.94□□□□□ -1.94
SDCBPO00560 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.94□□□□□ -1.94
SDCBPO00560 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.94□□□□□ -1.94
SDCBPO00560 AP000893.1-201ENST00000474462 794 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 AC087385.1-201ENST00000475062 312 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 AC091959.2-201ENST00000477363 321 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 AC011037.1-201ENST00000483964 558 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 AC092593.2-201ENST00000513866 913 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.94□□□□□ -1.94
SDCBPO00560 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.94□□□□□ -1.94
SDCBPO00560 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.94□□□□□ -1.94
SDCBPO00560 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.94□□□□□ -1.94
SDCBPO00560 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.94□□□□□ -1.94
SDCBPO00560 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.94□□□□□ -1.94
SDCBPO00560 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.94□□□□□ -1.94
SDCBPO00560 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.94□□□□□ -1.94
SDCBPO00560 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.94□□□□□ -1.94
SDCBPO00560 AC068831.8-201ENST00000620171 435 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.94□□□□□ -1.94
SDCBPO00560 CFTRP2-201ENST00000634304 199 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SDCBPO00560 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SDCBPO00560 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.94□□□□□ -1.94
SDCBPO00560 AC090337.1-201ENST00000579651 2074 ntBASIC2.94□□□□□ -1.94
SDCBPO00560 AL356317.1-201ENST00000396110 1436 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SDCBPO00560 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.93□□□□□ -1.94
SDCBPO00560 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SDCBPO00560 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SDCBPO00560 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SDCBPO00560 RNA5SP515-201ENST00000364570 118 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 RNA5SP51-201ENST00000364750 119 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.93□□□□□ -1.94
SDCBPO00560 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SDCBPO00560 U8.11-201ENST00000384699 133 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 U8.12-201ENST00000384701 133 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 MT-TP-201ENST00000387461 68 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 SNORA57.1-201ENST00000391227 145 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 AC007066.1-201ENST00000392902 381 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
SDCBPO00560 MIR1193-201ENST00000408109 78 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 RN7SKP53-201ENST00000411337 315 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 RNA5SP107-201ENST00000411358 122 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.93□□□□□ -1.94
SDCBPO00560 AL035423.1-201ENST00000420331 213 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 AC007064.3-201ENST00000422608 359 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 TRGV7-201ENST00000427089 353 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.93□□□□□ -1.94
SDCBPO00560 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.93□□□□□ -1.94
SDCBPO00560 HMGN1P18-201ENST00000457642 277 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 U8.18-201ENST00000459285 133 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 RN7SL330P-201ENST00000469709 307 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 RN7SL594P-201ENST00000470590 287 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 AC023598.1-201ENST00000472521 361 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 SETP14-201ENST00000497538 873 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.93□□□□□ -1.94
SDCBPO00560 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.93□□□□□ -1.94
SDCBPO00560 NDUFB4P9-201ENST00000511646 388 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 AC108471.1-201ENST00000513977 287 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.93□□□□□ -1.94
SDCBPO00560 RANP9-201ENST00000519957 271 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 AC007991.1-201ENST00000522680 631 ntBASIC2.93□□□□□ -1.94
SDCBPO00560 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms