Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU6-603P-201ENST00000411403 107 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 HMGB3P20-201ENST00000417997 600 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AL391219.1-201ENST00000422570 483 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 NANOGP6-201ENST00000429190 847 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AL356535.1-201ENST00000440335 398 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC007000.2-201ENST00000442564 487 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 YWHAQP9-201ENST00000445891 512 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 RPL21P23-201ENST00000446654 460 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC010655.1-201ENST00000449336 292 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC093663.2-201ENST00000484625 313 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC004069.2-201ENST00000505438 1114 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 RN7SKP209-201ENST00000516888 304 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 DUXAP2-201ENST00000519198 589 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AP000619.3-201ENST00000535634 1127 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC023161.2-201ENST00000551218 780 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 LINC00557-201ENST00000563184 1279 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC135178.6-201ENST00000605314 398 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 U3.45-201ENST00000607547 219 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC019176.2-201ENST00000611579 315 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AL356094.1-201ENST00000624663 1212 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 BMS1P21-201ENST00000634565 365 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 AC244258.1-201ENST00000637553 1071 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 MIR218-2-201ENST00000385006 110 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 RNU2-65P-201ENST00000410162 185 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AC068533.1-201ENST00000418542 415 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AC073508.1-201ENST00000428866 656 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 MTCYBP12-201ENST00000440559 1134 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AC092809.1-201ENST00000441469 474 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 RPL23AP12-201ENST00000467573 473 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 METTL15P1-201ENST00000481421 1045 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 RN7SL293P-201ENST00000481765 281 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AC025459.1-201ENST00000504072 156 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 CBX3P2-202ENST00000583365 535 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 OR1AB1P-201ENST00000585564 761 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 EIF1P6-201ENST00000600054 334 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AC092354.2-201ENST00000607786 514 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AL357559.1-201ENST00000622228 274 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AC243312.2-201ENST00000623340 601 ntBASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMIM28A0A1B0GU29 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.9□□□□□ -1.78
SMIM28A0A1B0GU29 AC000123.3-201ENST00000624029 4975 ntBASIC3.9□□□□□ -1.78
SMIM28A0A1B0GU29 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SMIM28A0A1B0GU29 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SMIM28A0A1B0GU29 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.9□□□□□ -1.78
SMIM28A0A1B0GU29 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 SNORA63.1-201ENST00000362493 131 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 RNU6-304P-201ENST00000364855 107 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 RNU6-146P-201ENST00000384602 108 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 MIR183-201ENST00000384958 110 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 MTHFD2P2-201ENST00000407725 247 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 BX119904.1-201ENST00000432026 348 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 CYCSP43-201ENST00000438233 310 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AL353718.1-201ENST00000451028 517 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AC099563.1-201ENST00000456086 418 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 MTND2P30-201ENST00000456663 382 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AC010342.1-201ENST00000514047 877 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms