Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.14□□□□□ -1.59
PCDHGA3Q9Y5H0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA3Q9Y5H0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHGA3Q9Y5H0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHGA3Q9Y5H0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA3Q9Y5H0 AC114947.2-201ENST00000565748 2125 ntBASIC5.14□□□□□ -1.59
PCDHGA3Q9Y5H0 AL356473.1-201ENST00000406203 1408 ntBASIC5.14□□□□□ -1.59
PCDHGA3Q9Y5H0 AC135352.1-201ENST00000506173 1418 ntBASIC5.14□□□□□ -1.59
PCDHGA3Q9Y5H0 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA3Q9Y5H0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA3Q9Y5H0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AL031985.3-201ENST00000565390 2449 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AC068870.1-201ENST00000563737 2455 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 OR4F13P-202ENST00000560066 2054 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AL121657.1-201ENST00000327215 531 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AL121886.1-201ENST00000358609 435 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 RNU5F-7P-201ENST00000363696 115 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 SNORA68.2-201ENST00000391263 128 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 RN7SKP142-201ENST00000411236 328 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 MTCO3P41-201ENST00000414801 328 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AC073136.2-201ENST00000417282 849 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AC092647.1-201ENST00000420654 287 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AL389915.1-201ENST00000422463 466 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 RIMKLBP2-201ENST00000424737 654 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 PAXBP1P1-201ENST00000449315 447 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AC091685.2-201ENST00000454924 864 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 SNRPFP4-201ENST00000456366 242 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 RPL35AP28-201ENST00000459730 331 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AC021678.1-201ENST00000505195 936 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 SNORD116-26-201ENST00000516006 96 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AP001922.4-201ENST00000526967 290 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 OR4A45P-201ENST00000529954 901 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AC024940.3-201ENST00000538551 316 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AC084757.1-201ENST00000559987 490 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 RSL24D1P11-201ENST00000591045 491 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 RPL23AP92-201ENST00000603609 255 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AC025594.3-201ENST00000613068 790 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AP001784.1-201ENST00000624107 428 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AP001642.1-201ENST00000624727 2117 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 CYP4F35P-202ENST00000636121 390 ntBASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PCDHGA3Q9Y5H0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AL034549.2-201ENST00000618285 3373 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AC092681.1-201ENST00000297369 291 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 RNU4-44P-201ENST00000363050 141 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 RNU6-1226P-201ENST00000384317 107 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 RNY3P10-201ENST00000384764 102 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 RNU2-21P-201ENST00000410368 188 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 RN7SKP216-201ENST00000411050 312 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 RPL31P2-201ENST00000413849 377 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AC093162.1-201ENST00000419682 124 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 FNDC3CP-201ENST00000420795 1155 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 CYCSP46-201ENST00000423569 204 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AC124944.2-201ENST00000429866 1242 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AL365184.2-201ENST00000431139 435 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms