Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGB1Q9Y5G3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGB1Q9Y5G3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHGB1Q9Y5G3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGB1Q9Y5G3 AL390237.1-201ENST00000404226 1415 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC092104.1-201ENST00000497346 1441 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 ZFRP1-201ENST00000457579 2970 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC009313.2-201ENST00000417893 1941 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AL136164.3-201ENST00000624429 3978 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 Y_RNA.77-201ENST00000362962 107 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 Y_RNA.192-201ENST00000363977 102 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 Y_RNA.194-201ENST00000363985 102 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 snoZ40.1-201ENST00000364540 72 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 RPL23AP59-201ENST00000399415 461 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 HSPD1P16-201ENST00000402302 394 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AL357515.1-201ENST00000402967 542 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AL079342.2-201ENST00000403367 482 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 RN7SKP167-201ENST00000411047 285 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 RPL6P29-201ENST00000414863 865 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC004074.1-201ENST00000421810 1063 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC245028.1-201ENST00000423259 256 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC019178.2-201ENST00000423595 505 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 RPL21P43-201ENST00000425440 472 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 MTCO3P30-201ENST00000426425 670 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 RPS17P8-201ENST00000434525 335 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 MTND4P6-201ENST00000438297 472 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC092013.1-201ENST00000438795 332 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AL360221.1-201ENST00000445989 335 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 OR52J1P-201ENST00000450596 932 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 BZW1P2-201ENST00000473537 826 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 HMGN2P25-201ENST00000486956 268 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC021146.8-201ENST00000507455 733 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC113347.3-201ENST00000509113 148 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 OR5H4P-201ENST00000510851 923 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 MTND5P13-201ENST00000513046 1079 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 MTCO2P32-201ENST00000514865 403 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 RAB9BP1-201ENST00000519581 626 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 C1GALT1P3-201ENST00000522049 819 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 NBEAP1-201ENST00000554452 979 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC022069.1-201ENST00000582910 658 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC106791.2-201ENST00000604680 391 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AC010738.1-201ENST00000604970 987 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 AL133412.1-201ENST00000380194 2992 ntBASIC4.29□□□□□ -1.72
PCDHGB1Q9Y5G3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGB1Q9Y5G3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGB1Q9Y5G3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGB1Q9Y5G3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGB1Q9Y5G3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.28□□□□□ -1.72
PCDHGB1Q9Y5G3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms