Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.09□□□□□ -1.6
PCDHB1Q9Y5F3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
PCDHB1Q9Y5F3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 SNRPEP3-201ENST00000338402 276 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 RNVU1-6-201ENST00000364688 164 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 RNU4-91P-201ENST00000364778 135 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 RNA5SP455-201ENST00000365190 119 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 RNU6-192P-201ENST00000391253 100 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 COX6B1P1-201ENST00000415962 213 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 MTCO1P21-201ENST00000416634 589 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC006366.1-201ENST00000422002 759 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AL953862.1-201ENST00000423016 168 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC245028.1-201ENST00000423259 256 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 SDCBPP2-201ENST00000424643 885 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 CENPIP1-201ENST00000425713 902 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 USP9YP9-201ENST00000429406 715 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC092427.1-201ENST00000439177 601 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 MTCO1P19-201ENST00000443487 500 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AP000936.2-201ENST00000447151 681 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC245028.2-201ENST00000458673 253 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 RN7SL443P-201ENST00000464331 290 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 RN7SL459P-201ENST00000481078 302 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 RN7SL809P-201ENST00000482040 297 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 HMGN2P25-201ENST00000486956 268 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 RN7SL441P-201ENST00000492388 296 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 OR4G11P-201ENST00000492842 939 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 NIFKP7-201ENST00000503365 834 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 DEFB131D-201ENST00000526803 184 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC063949.1-201ENST00000552900 865 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AL391156.1-201ENST00000554965 554 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC027807.1-201ENST00000559921 996 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 PCMTD1P2-201ENST00000565017 355 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AC107982.3-201ENST00000584957 985 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 NF1P5-201ENST00000588287 448 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 IRF5P1-201ENST00000504852 2164 ntBASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB1Q9Y5F3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 ADAM5-202ENST00000399789 1942 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC093536.2-201ENST00000565257 1406 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 THAP12P4-201ENST00000528321 2266 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 RNU6-462P-201ENST00000362659 105 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 RNU6-374P-201ENST00000364146 108 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 OR5H15-201ENST00000383696 930 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 SNORA2.3-201ENST00000383920 135 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 RNA5SP87-201ENST00000384155 118 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 MIR192-201ENST00000384915 110 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 Y_RNA.619-201ENST00000410951 90 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 RN7SKP142-201ENST00000411236 328 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms