Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 AC025125.1-201ENST00000624743 1922 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 MIR335-201ENST00000362173 94 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 RNA5SP188-201ENST00000362916 129 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 Y_RNA.352-201ENST00000365439 102 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 SNORA41-201ENST00000384675 132 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 MIR558-201ENST00000384920 94 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 MRPL35P1-201ENST00000404272 572 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 AC093156.1-201ENST00000440382 670 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 OR52I1-201ENST00000450052 1050 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 RPL23AP41-201ENST00000484754 458 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 OR51A1P-201ENST00000511110 946 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 IGKV2-38-201ENST00000517443 247 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 OR11H5P-201ENST00000554039 926 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 AC090517.1-201ENST00000569307 266 ntBASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM35Q9UPQ4 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 Y_RNA.269-201ENST00000364685 89 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 RNU6-343P-201ENST00000364709 104 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 AC011933.1-201ENST00000413334 321 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 PLA2G12AP2-201ENST00000424744 264 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 AC130360.1-201ENST00000425489 1117 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 AL031659.1-201ENST00000447075 539 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 AC005297.2-201ENST00000450430 606 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 SNORA74.1-201ENST00000516320 180 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 IGHV7-34-1-201ENST00000519200 350 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 DEFB109D-201ENST00000529497 240 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 SUB1P3-201ENST00000564581 315 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 MIR548Y-201ENST00000582739 110 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 BX284668.6-201ENST00000606899 438 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 AC073869.10-201ENST00000642016 354 ntBASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.42□□□□□ -1.06
TRIM35Q9UPQ4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 CCT8P1-201ENST00000413611 1657 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AL603910.2-201ENST00000407268 136 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AC096632.1-201ENST00000427395 310 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms