Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AL161909.1-201ENST00000397390 712 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 RNA5SP306-201ENST00000411087 107 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 RNA5SP39-201ENST00000411245 120 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC016397.1-201ENST00000412463 242 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AL158050.1-201ENST00000416077 457 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC241520.1-201ENST00000422654 1099 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 RPL23AP38-201ENST00000423801 469 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 NANOGP6-201ENST00000429190 847 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 GSTA7P-201ENST00000438425 448 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 HMGN3P1-201ENST00000453847 193 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 RPL36AP13-201ENST00000457490 317 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 RNA5SP246-201ENST00000458909 119 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AF213884.1-201ENST00000488102 463 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC139783.2-201ENST00000504847 1145 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 MTND3P24-201ENST00000506306 329 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC005921.1-201ENST00000510589 286 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC099522.1-202ENST00000514718 367 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 MTCO1P30-201ENST00000515244 580 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AP004242.1-201ENST00000533701 349 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC007599.1-201ENST00000568688 1174 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AL049634.3-201ENST00000604968 457 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC018754.1-201ENST00000607486 925 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AL023583.1-201ENST00000607518 1143 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC245100.7-201ENST00000609678 442 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 MIR6748-201ENST00000610433 71 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC121761.2-201ENST00000617300 689 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AL163152.1-201ENST00000642001 374 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 ZNF962P-201ENST00000443465 3140 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC005261.4-201ENST00000600047 1385 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 SNORA31-201ENST00000362607 130 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 RNU6-1243P-201ENST00000364028 107 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 OR6C69P-201ENST00000394268 893 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 FABP12P1-201ENST00000401911 322 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AL355379.1-201ENST00000405542 640 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 JKAMPP1-201ENST00000413804 919 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC016712.1-201ENST00000431088 378 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 MTCO1P43-201ENST00000431831 488 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC089999.1-201ENST00000460336 374 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC010307.1-201ENST00000467206 836 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 RNF138P1-201ENST00000502765 546 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC025768.1-201ENST00000510057 267 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC027338.1-201ENST00000514840 825 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 RNU6-1102P-201ENST00000516149 96 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC022655.2-201ENST00000577280 318 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC023575.1-201ENST00000580510 358 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC112230.1-201ENST00000604342 547 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AC233309.1-201ENST00000619522 751 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 AL445493.3-201ENST00000619568 477 ntBASIC3.77□□□□□ -1.81
CHRNA9Q9UGM1 MIR8059-201ENST00000620427 81 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms