Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RNA5SP241-201ENST00000391326 114 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC016769.3-201ENST00000396562 315 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AL590084.2-201ENST00000401481 382 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 HMGB1P17-201ENST00000403495 628 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AL390316.1-201ENST00000406279 553 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 PIGPP2-201ENST00000411569 458 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 USP9YP33-201ENST00000412220 421 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN1Q9P244 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 OR2AM1P-201ENST00000422137 422 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AL022400.1-201ENST00000423946 935 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 USP9YP35-201ENST00000435696 412 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 HMGB3P9-201ENST00000441799 583 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 OR7E125P-201ENST00000443450 846 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC112498.1-201ENST00000444401 332 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC090804.1-201ENST00000448870 490 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 BX842559.2-201ENST00000451418 605 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC091180.1-201ENST00000462104 372 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC146507.1-201ENST00000468335 354 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 RN7SL738P-201ENST00000470264 297 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 LINC00888-204ENST00000487386 421 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN1Q9P244 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 ATP1B1P1-201ENST00000509767 915 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 XKRY-201ENST00000510392 1100 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 MTND1P22-201ENST00000510572 951 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 RNA5SP43-201ENST00000516559 110 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC104986.1-201ENST00000517978 436 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC090819.1-201ENST00000523800 1111 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC008015.1-201ENST00000555505 465 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 CYCSP2-201ENST00000558168 301 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 HMGB3P26-201ENST00000560051 582 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 MIR4472-2-201ENST00000582069 67 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 VN1R90P-201ENST00000595717 726 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC004987.4-201ENST00000603383 338 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC078883.4-201ENST00000623218 367 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN1Q9P244 MAPK10-320ENST00000641462 6696 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 GDI2P1-201ENST00000429312 1336 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 MTCO1P24-201ENST00000515438 1558 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC011755.1-201ENST00000623763 2049 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 AC091046.3-201ENST00000631455 1574 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN1Q9P244 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN1Q9P244 AL450345.1-202ENST00000605741 3881 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 DDX43P2-201ENST00000604753 1354 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN1Q9P244 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN1Q9P244 AC025031.4-201ENST00000621248 3271 ntBASIC4.64□□□□□ -1.67
LRFN1Q9P244 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN1Q9P244 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN1Q9P244 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN1Q9P244 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN1Q9P244 IRF5P1-201ENST00000504852 2164 ntBASIC4.64□□□□□ -1.67
LRFN1Q9P244 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN1Q9P244 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.64□□□□□ -1.67
LRFN1Q9P244 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LRFN1Q9P244 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.64□□□□□ -1.67
LRFN1Q9P244 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.64□□□□□ -1.67
LRFN1Q9P244 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
LRFN1Q9P244 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.64□□□□□ -1.67
LRFN1Q9P244 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.64□□□□□ -1.67
LRFN1Q9P244 ZNF734P-201ENST00000419494 1534 ntBASIC4.64□□□□□ -1.67
LRFN1Q9P244 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN1Q9P244 SNORA2.3-201ENST00000383920 135 ntBASIC4.64□□□□□ -1.67
LRFN1Q9P244 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LRFN1Q9P244 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.64□□□□□ -1.67
LRFN1Q9P244 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.64□□□□□ -1.67
LRFN1Q9P244 P2RY10P2-201ENST00000416730 913 ntBASIC4.64□□□□□ -1.67
LRFN1Q9P244 TMBIM7P-201ENST00000418074 855 ntBASIC4.64□□□□□ -1.67
LRFN1Q9P244 AL953862.1-201ENST00000423016 168 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms