Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC027544.3-201ENST00000535082 757 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 PDCD5P1-201ENST00000543528 309 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC090515.3-201ENST00000560431 315 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC011445.2-201ENST00000599274 173 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 BX664608.1-201ENST00000610519 487 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 MIR4302-201ENST00000638058 60 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTN3Q9P232 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC079753.1-201ENST00000623243 3868 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTN3Q9P232 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTN3Q9P232 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTN3Q9P232 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC005224.3-201ENST00000584683 2140 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTN3Q9P232 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTN3Q9P232 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.27□□□□□ -1.4
CNTN3Q9P232 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNTN3Q9P232 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNTN3Q9P232 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 RNU6-456P-201ENST00000384493 107 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 MIR323B-201ENST00000385269 82 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 ELOCP4-201ENST00000420090 333 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 MTND2P23-201ENST00000422990 651 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 RPL35AP12-201ENST00000425362 338 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC096775.1-201ENST00000437724 448 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 RPL7P12-201ENST00000446719 750 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 PPIAP20-201ENST00000449839 135 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC004129.2-201ENST00000457229 287 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC026410.2-201ENST00000460281 156 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 RPL7P15-201ENST00000461190 712 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC021660.1-201ENST00000465006 554 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC007537.2-201ENST00000472093 511 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 RN7SL174P-201ENST00000475578 289 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC104563.1-201ENST00000476147 376 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC096576.1-201ENST00000489014 359 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC009120.1-201ENST00000493458 473 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 TMEM251P1-201ENST00000503717 318 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 RNU6-327P-201ENST00000516270 127 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC068714.1-201ENST00000559623 800 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 MIR3671-201ENST00000580455 88 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 RN7SL787P-201ENST00000613000 284 ntBASIC6.27□□□□□ -1.41
CNTN3Q9P232 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNTN3Q9P232 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTN3Q9P232 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTN3Q9P232 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CNTN3Q9P232 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTN3Q9P232 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTN3Q9P232 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTN3Q9P232 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 RNA5SP46-201ENST00000362370 120 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 SNORA64.1-201ENST00000362600 132 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 Y_RNA.58-201ENST00000362807 102 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 SNORD1C-201ENST00000363315 78 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 Y_RNA.154-201ENST00000363624 102 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 RNY3P1-201ENST00000365085 102 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 RNY3-201ENST00000365484 102 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 SNORA69-201ENST00000383895 132 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 Y_RNA.490-201ENST00000384413 102 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 AC013429.2-201ENST00000418798 781 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms