Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTNNBIP1Q9NSA3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 PRO1804-201ENST00000623780 2050 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 RNA5SP391-201ENST00000363456 119 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 SNORA57.3-201ENST00000411095 141 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 RPL30P2-201ENST00000414021 291 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 RBMY2KP-201ENST00000418221 992 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 Z97055.1-201ENST00000419730 712 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 AL691449.1-201ENST00000426570 421 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 AC006989.1-201ENST00000427212 131 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 CKS1BP5-201ENST00000434172 273 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 AC093331.1-201ENST00000521474 169 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 AC006960.3-201ENST00000561845 705 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 MIR4330-201ENST00000579077 105 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 MIR3690-201ENST00000580266 75 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 KLKP1-201ENST00000595979 403 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 AL163642.2-201ENST00000604722 1019 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 AC099778.2-201ENST00000610904 211 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 ZNF826P-207ENST00000622273 1910 ntBASIC3.07□□□□□ -1.92
CTNNBIP1Q9NSA3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 RNU4-39P-201ENST00000362455 127 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 RNU6-600P-201ENST00000362524 99 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 ST13P16-201ENST00000401760 781 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 DNAJC19P6-201ENST00000401853 280 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 GSTA12P-201ENST00000402398 508 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AL590290.1-201ENST00000405336 380 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 RPL23AP47-201ENST00000408017 460 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 MOB1AP1-201ENST00000430903 535 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AL590103.1-201ENST00000434488 307 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 RPL23AP33-201ENST00000442301 452 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 RPL12P26-201ENST00000452430 487 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 C1DP3-201ENST00000455013 423 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 PTGES3P5-201ENST00000455109 434 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC110792.1-201ENST00000491826 472 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 NDUFA5P2-201ENST00000519723 344 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC008489.1-201ENST00000524271 483 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AP003730.1-201ENST00000524605 285 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC118273.1-201ENST00000525324 3006 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 NPM1P45-201ENST00000583151 559 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AL021707.7-201ENST00000607991 416 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC117490.2-201ENST00000610042 594 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 Mico1.1-201ENST00000611698 204 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 RNVU1-4-201ENST00000612985 164 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 SNORA50A-202ENST00000629536 136 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 MIR4496-201ENST00000635896 61 ntBASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CTNNBIP1Q9NSA3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.05□□□□□ -1.92
CTNNBIP1Q9NSA3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CTNNBIP1Q9NSA3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms