Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 AC009120.2-204ENST00000621548 2032 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 RNA5SP389-201ENST00000362610 115 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 RNA5SP226-201ENST00000362653 115 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 RNU6-1252P-201ENST00000363054 104 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 RNA5SP161-201ENST00000363871 115 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 RN7SKP118-201ENST00000364331 330 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 RNA5SP149-201ENST00000364952 92 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 SNORD116-11-201ENST00000383882 92 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 MIR199B-201ENST00000384849 110 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 CISD1P1-201ENST00000393907 327 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 RNU6-370P-201ENST00000411008 104 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 AL713922.1-201ENST00000416477 747 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 AC005019.1-201ENST00000436455 431 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 MTND1P17-201ENST00000448961 204 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 RN7SL153P-201ENST00000486501 292 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 RN7SL792P-201ENST00000496286 305 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 RPL7AP2-201ENST00000496515 740 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 MRPS33P2-201ENST00000507850 322 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 MIR3171-201ENST00000584270 74 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 HMGB2P1-201ENST00000591146 634 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 OR7A18P-201ENST00000600416 277 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 MIR6715B-201ENST00000637172 77 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 AC124944.3-204ENST00000641191 150 ntBASIC8.34□□□□□ -1.07
RTN4Q9NQC3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
RTN4Q9NQC3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 RNA5-8SP7-201ENST00000363443 155 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 Y_RNA.187-201ENST00000363918 113 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 MIR555-201ENST00000384987 96 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 RNA5SP296-201ENST00000410523 111 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 ATG3P1-201ENST00000419507 911 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 MTATP6P4-201ENST00000427725 675 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AL389925.1-201ENST00000432257 728 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AL591212.2-201ENST00000433923 257 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 TDGF1P1-201ENST00000445734 527 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 HMGN1P10-201ENST00000474557 553 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 RN7SL65P-201ENST00000485221 315 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AL445187.1-201ENST00000502685 260 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 COPS8P3-201ENST00000526024 482 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AL355836.1-201ENST00000555951 870 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AC007619.2-201ENST00000605743 379 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AC073488.5-201ENST00000631993 754 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AC073869.8-201ENST00000641806 335 ntBASIC8.33□□□□□ -1.08
RTN4Q9NQC3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms