Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AL606834.3-201ENST00000602615 496 ntBASIC4.01□□□□□ -1.77
UBQLN3Q9H347 AL020997.3-201ENST00000602843 359 ntBASIC4.01□□□□□ -1.77
UBQLN3Q9H347 RPAP2P1-201ENST00000603626 1168 ntBASIC4.01□□□□□ -1.77
UBQLN3Q9H347 AC073387.2-201ENST00000604797 784 ntBASIC4.01□□□□□ -1.77
UBQLN3Q9H347 AC024933.1-201ENST00000608472 348 ntBASIC4.01□□□□□ -1.77
UBQLN3Q9H347 AL359535.1-201ENST00000612100 1087 ntBASIC4.01□□□□□ -1.77
UBQLN3Q9H347 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.01□□□□□ -1.77
UBQLN3Q9H347 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.01□□□□□ -1.77
UBQLN3Q9H347 uc_338.13-201ENST00000618243 179 ntBASIC4.01□□□□□ -1.77
UBQLN3Q9H347 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
UBQLN3Q9H347 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
UBQLN3Q9H347 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.01□□□□□ -1.77
UBQLN3Q9H347 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
UBQLN3Q9H347 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
UBQLN3Q9H347 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UBQLN3Q9H347 MTND4P8-201ENST00000514997 1362 ntBASIC4.01□□□□□ -1.77
UBQLN3Q9H347 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4□□□□□ -1.77
UBQLN3Q9H347 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UBQLN3Q9H347 AL645568.2-201ENST00000432815 1337 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
UBQLN3Q9H347 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UBQLN3Q9H347 AC068254.2-201ENST00000623938 3577 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UBQLN3Q9H347 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4□□□□□ -1.77
UBQLN3Q9H347 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4□□□□□ -1.77
UBQLN3Q9H347 RN7SKP44-201ENST00000363602 316 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 SNORA70.2-201ENST00000364506 135 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 SFR1P1-201ENST00000403720 688 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 AC234779.1-201ENST00000425910 285 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4□□□□□ -1.77
UBQLN3Q9H347 PRELID3BP10-201ENST00000431957 584 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4□□□□□ -1.77
UBQLN3Q9H347 HLA-N-201ENST00000437516 135 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 TRIM60P9Y-201ENST00000438459 816 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 UBE2V1P3-201ENST00000439651 417 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 RAB11AP1-201ENST00000442978 646 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 TRIM60P11Y-201ENST00000445313 801 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4□□□□□ -1.77
UBQLN3Q9H347 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4□□□□□ -1.77
UBQLN3Q9H347 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4□□□□□ -1.77
UBQLN3Q9H347 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4□□□□□ -1.77
UBQLN3Q9H347 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4□□□□□ -1.77
UBQLN3Q9H347 AC133473.1-201ENST00000455173 299 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4□□□□□ -1.77
UBQLN3Q9H347 SNORD108-201ENST00000459332 71 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 AC018635.1-201ENST00000468292 1030 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4□□□□□ -1.77
UBQLN3Q9H347 AC006499.6-201ENST00000511169 607 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4□□□□□ -1.77
UBQLN3Q9H347 snoZ278.1-201ENST00000517059 112 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 HIGD1AP6-201ENST00000521833 279 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 NDUFS5P6-201ENST00000529136 295 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4□□□□□ -1.77
UBQLN3Q9H347 AC069240.1-201ENST00000548774 375 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4□□□□□ -1.77
UBQLN3Q9H347 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4□□□□□ -1.77
UBQLN3Q9H347 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4□□□□□ -1.77
UBQLN3Q9H347 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4□□□□□ -1.77
UBQLN3Q9H347 AC136624.4-201ENST00000573044 370 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 MIR4697-201ENST00000582977 78 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4□□□□□ -1.77
UBQLN3Q9H347 AC113403.1-201ENST00000604910 193 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4□□□□□ -1.77
UBQLN3Q9H347 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UBQLN3Q9H347 MLECP1-201ENST00000615893 709 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 AC006338.2-201ENST00000616864 791 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4□□□□□ -1.77
UBQLN3Q9H347 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
UBQLN3Q9H347 AL356121.2-201ENST00000624715 780 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4□□□□□ -1.77
UBQLN3Q9H347 AC099654.9-201ENST00000637055 678 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 FAM157B-203ENST00000639350 358 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4□□□□□ -1.77
UBQLN3Q9H347 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4□□□□□ -1.77
UBQLN3Q9H347 EED-206ENST00000527888 1422 ntTSL 2 BASIC4□□□□□ -1.77
UBQLN3Q9H347 SGO1P1-201ENST00000603525 1447 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4□□□□□ -1.77
UBQLN3Q9H347 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4□□□□□ -1.77
UBQLN3Q9H347 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4□□□□□ -1.77
UBQLN3Q9H347 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4□□□□□ -1.77
UBQLN3Q9H347 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
UBQLN3Q9H347 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
UBQLN3Q9H347 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UBQLN3Q9H347 PNPT1P2-201ENST00000456768 2050 ntBASIC3.99□□□□□ -1.77
UBQLN3Q9H347 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UBQLN3Q9H347 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.99□□□□□ -1.77
UBQLN3Q9H347 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
UBQLN3Q9H347 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
UBQLN3Q9H347 RNU6-236P-201ENST00000363886 106 ntBASIC3.99□□□□□ -1.77
UBQLN3Q9H347 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.99□□□□□ -1.77
UBQLN3Q9H347 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UBQLN3Q9H347 SNORA70E-201ENST00000384492 135 ntBASIC3.99□□□□□ -1.77
UBQLN3Q9H347 RNU6-1151P-201ENST00000384684 107 ntBASIC3.99□□□□□ -1.77
UBQLN3Q9H347 MIR16-1-201ENST00000385271 89 ntBASIC3.99□□□□□ -1.77
UBQLN3Q9H347 GSTA8P-201ENST00000404253 637 ntBASIC3.99□□□□□ -1.77
UBQLN3Q9H347 MIR1911-201ENST00000410783 80 ntBASIC3.99□□□□□ -1.77
UBQLN3Q9H347 OR51A3P-201ENST00000413596 924 ntBASIC3.99□□□□□ -1.77
UBQLN3Q9H347 LIPT1P1-201ENST00000415870 1186 ntBASIC3.99□□□□□ -1.77
UBQLN3Q9H347 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms