Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ELOCP11-201ENST00000436690 332 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 ELOCP16-201ENST00000444494 332 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 TPTE2P6-202ENST00000445572 1007 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 RPL23AP23-201ENST00000452590 471 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 VN1R105P-201ENST00000486595 910 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 AC120057.2-201ENST00000571520 271 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 RN7SL703P-201ENST00000578485 302 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 AC025946.2-201ENST00000603398 234 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 AC099676.1-201ENST00000608886 657 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 AL356490.1-201ENST00000623079 479 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 AF001550.2-201ENST00000636643 217 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 MAPK10-373ENST00000641983 6772 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 HSPA8P19-201ENST00000505359 1517 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 RNA5SP322-201ENST00000363617 119 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 OR52E6-202ENST00000379946 954 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 RNU1-89P-201ENST00000384592 164 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 XKRYP4-201ENST00000414395 483 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 MTND2P15-201ENST00000418575 892 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 MTND4LP7-201ENST00000431728 294 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 SNORA71B-202ENST00000439232 272 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AL513321.1-201ENST00000441175 761 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 XKRYP5-201ENST00000449659 483 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 CYCSP53-201ENST00000455540 265 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 FTH1P24-201ENST00000503502 462 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC004069.2-201ENST00000505438 1114 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC010460.1-201ENST00000507087 466 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 RAC1P2-201ENST00000511164 579 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 COX6B1P6-201ENST00000522347 255 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 CKS1BP1-201ENST00000555221 240 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC015726.1-201ENST00000602353 681 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC011374.2-201ENST00000607135 526 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC245389.2-201ENST00000616023 576 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC004825.2-201ENST00000616634 455 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 MIR6875-201ENST00000617506 72 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC243756.2-201ENST00000618406 463 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC242843.1-201ENST00000618702 573 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AC079684.1-201ENST00000621405 437 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 AL118508.4-201ENST00000624142 1176 ntBASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCSER1Q9C0I3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 LINC00561-201ENST00000565815 2738 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 AL445189.1-201ENST00000405722 338 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 ZNF602P-201ENST00000405929 924 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 VTA1P1-201ENST00000414044 866 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 AC114814.2-201ENST00000419195 485 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 RPL21P109-201ENST00000422213 475 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 RPS15AP29-201ENST00000445539 400 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 TPRKBP1-201ENST00000456243 481 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 OR9M1P-201ENST00000459641 921 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 RN7SL93P-201ENST00000463035 293 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 TRBV12-2-201ENST00000489763 344 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 RNA5SP164-201ENST00000516533 110 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 AC107016.1-201ENST00000550463 337 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 AC106785.1-201ENST00000565935 262 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms