Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RPL5P23-201ENST00000496040 868 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AC110794.1-201ENST00000505816 425 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AL121594.4-201ENST00000556211 1196 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AC116312.1-201ENST00000606841 314 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AC015802.5-201ENST00000607478 399 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AC233309.1-201ENST00000619522 751 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCAPERQ9BY12 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCAPERQ9BY12 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCAPERQ9BY12 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCAPERQ9BY12 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCAPERQ9BY12 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.22□□□□□ -1.57
SCAPERQ9BY12 AC093698.1-201ENST00000423843 571 ntBASIC5.22□□□□□ -1.57
SCAPERQ9BY12 NPM1P48-201ENST00000436002 853 ntBASIC5.22□□□□□ -1.57
SCAPERQ9BY12 YWHAQP9-201ENST00000445891 512 ntBASIC5.22□□□□□ -1.57
SCAPERQ9BY12 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.22□□□□□ -1.57
SCAPERQ9BY12 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.22□□□□□ -1.57
SCAPERQ9BY12 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCAPERQ9BY12 AL121603.1-201ENST00000553815 142 ntBASIC5.22□□□□□ -1.57
SCAPERQ9BY12 AC034105.3-201ENST00000565294 442 ntBASIC5.22□□□□□ -1.57
SCAPERQ9BY12 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.22□□□□□ -1.57
SCAPERQ9BY12 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.22□□□□□ -1.57
SCAPERQ9BY12 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SCAPERQ9BY12 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SCAPERQ9BY12 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SCAPERQ9BY12 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SCAPERQ9BY12 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.21□□□□□ -1.58
SCAPERQ9BY12 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.21□□□□□ -1.58
SCAPERQ9BY12 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.21□□□□□ -1.58
SCAPERQ9BY12 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SCAPERQ9BY12 RPL5P18-201ENST00000406671 891 ntBASIC5.21□□□□□ -1.58
SCAPERQ9BY12 U3.39-201ENST00000408569 239 ntBASIC5.21□□□□□ -1.58
SCAPERQ9BY12 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.21□□□□□ -1.58
SCAPERQ9BY12 AL450263.2-201ENST00000439400 589 ntBASIC5.21□□□□□ -1.58
SCAPERQ9BY12 RPL21P8-201ENST00000465083 535 ntBASIC5.21□□□□□ -1.58
SCAPERQ9BY12 AC021678.1-201ENST00000505195 936 ntBASIC5.21□□□□□ -1.58
SCAPERQ9BY12 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.21□□□□□ -1.58
SCAPERQ9BY12 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.21□□□□□ -1.58
SCAPERQ9BY12 AC005476.1-201ENST00000554427 397 ntBASIC5.21□□□□□ -1.58
SCAPERQ9BY12 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.21□□□□□ -1.58
SCAPERQ9BY12 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.21□□□□□ -1.58
SCAPERQ9BY12 OOSP1P2-201ENST00000579644 351 ntBASIC5.21□□□□□ -1.58
SCAPERQ9BY12 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.21□□□□□ -1.58
SCAPERQ9BY12 AC067852.3-201ENST00000589177 561 ntBASIC5.21□□□□□ -1.58
SCAPERQ9BY12 AC009464.1-201ENST00000615731 469 ntBASIC5.21□□□□□ -1.58
SCAPERQ9BY12 AC138932.5-201ENST00000617759 563 ntBASIC5.21□□□□□ -1.58
SCAPERQ9BY12 DDX6P1-205ENST00000441966 1436 ntBASIC5.2□□□□□ -1.58
SCAPERQ9BY12 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SCAPERQ9BY12 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCAPERQ9BY12 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.2□□□□□ -1.58
SCAPERQ9BY12 RNA5SP197-201ENST00000363357 119 ntBASIC5.2□□□□□ -1.58
SCAPERQ9BY12 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SCAPERQ9BY12 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.2□□□□□ -1.58
SCAPERQ9BY12 AC107083.1-201ENST00000439643 279 ntBASIC5.2□□□□□ -1.58
SCAPERQ9BY12 AC092809.1-201ENST00000441469 474 ntBASIC5.2□□□□□ -1.58
SCAPERQ9BY12 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.2□□□□□ -1.58
SCAPERQ9BY12 RN7SL594P-201ENST00000470590 287 ntBASIC5.2□□□□□ -1.58
SCAPERQ9BY12 RPL7P38-201ENST00000488396 739 ntBASIC5.2□□□□□ -1.58
SCAPERQ9BY12 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.2□□□□□ -1.58
SCAPERQ9BY12 AC004024.1-201ENST00000549244 247 ntBASIC5.2□□□□□ -1.58
SCAPERQ9BY12 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.2□□□□□ -1.58
SCAPERQ9BY12 AC006023.1-201ENST00000603944 259 ntBASIC5.2□□□□□ -1.58
SCAPERQ9BY12 OTUD4P1-201ENST00000237841 3067 ntBASIC5.2□□□□□ -1.58
SCAPERQ9BY12 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCAPERQ9BY12 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCAPERQ9BY12 AC012020.1-201ENST00000624541 1728 ntBASIC5.19□□□□□ -1.58
SCAPERQ9BY12 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SCAPERQ9BY12 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SCAPERQ9BY12 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SCAPERQ9BY12 AF228730.2-201ENST00000438784 848 ntBASIC5.19□□□□□ -1.58
SCAPERQ9BY12 RPL7L1P1-201ENST00000448259 785 ntBASIC5.19□□□□□ -1.58
SCAPERQ9BY12 MTND6P32-201ENST00000457611 483 ntBASIC5.19□□□□□ -1.58
SCAPERQ9BY12 RPL23AP71-201ENST00000470966 469 ntBASIC5.19□□□□□ -1.58
SCAPERQ9BY12 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.19□□□□□ -1.58
SCAPERQ9BY12 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.19□□□□□ -1.58
SCAPERQ9BY12 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.19□□□□□ -1.58
SCAPERQ9BY12 AC010653.1-201ENST00000571108 881 ntBASIC5.19□□□□□ -1.58
SCAPERQ9BY12 AC006539.2-201ENST00000601729 572 ntBASIC5.19□□□□□ -1.58
SCAPERQ9BY12 AC091905.1-201ENST00000624400 311 ntBASIC5.19□□□□□ -1.58
SCAPERQ9BY12 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.19□□□□□ -1.58
SCAPERQ9BY12 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SCAPERQ9BY12 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.19□□□□□ -1.58
SCAPERQ9BY12 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SCAPERQ9BY12 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SCAPERQ9BY12 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCAPERQ9BY12 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCAPERQ9BY12 NACA3P-201ENST00000359690 648 ntBASIC5.18□□□□□ -1.58
SCAPERQ9BY12 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.18□□□□□ -1.58
SCAPERQ9BY12 RNU4-47P-201ENST00000410876 114 ntBASIC5.18□□□□□ -1.58
SCAPERQ9BY12 HMGN1P24-201ENST00000412282 298 ntBASIC5.18□□□□□ -1.58
SCAPERQ9BY12 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.18□□□□□ -1.58
SCAPERQ9BY12 RPS29P31-201ENST00000446147 164 ntBASIC5.18□□□□□ -1.58
SCAPERQ9BY12 AC023598.1-201ENST00000472521 361 ntBASIC5.18□□□□□ -1.58
SCAPERQ9BY12 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.18□□□□□ -1.58
SCAPERQ9BY12 RN7SKP209-201ENST00000516888 304 ntBASIC5.18□□□□□ -1.58
SCAPERQ9BY12 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.18□□□□□ -1.58
SCAPERQ9BY12 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.18□□□□□ -1.58
SCAPERQ9BY12 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.18□□□□□ -1.58
SCAPERQ9BY12 AL713922.2-201ENST00000619384 716 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms