Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 OR6C72P-201ENST00000451403 892 ntBASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC091564.1-201ENST00000464563 479 ntBASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC091959.2-201ENST00000477363 321 ntBASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 FCF1P3-201ENST00000496394 590 ntBASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 MTND4LP31-201ENST00000514859 294 ntBASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC093853.1-201ENST00000515689 483 ntBASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AL606490.9-201ENST00000603331 271 ntBASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC117490.2-201ENST00000610042 594 ntBASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 MIR6875-201ENST00000617506 72 ntBASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AL357559.1-201ENST00000622228 274 ntBASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AL356863.1-201ENST00000623378 1080 ntBASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 MIR423-201ENST00000362201 94 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 RNU6-1331P-201ENST00000363658 106 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 RNA5SP97-201ENST00000365006 84 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 SNORA3.3-201ENST00000408712 125 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 USP9YP7-201ENST00000436723 430 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 OR52Y1P-201ENST00000452418 828 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 USP9YP32-201ENST00000452432 430 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 RPL7P15-201ENST00000461190 712 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 NPM1P17-201ENST00000479221 602 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AP003168.1-201ENST00000530091 307 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 NPM1P35-201ENST00000533043 868 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AC009268.1-201ENST00000561352 1203 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AC009101.1-201ENST00000568135 242 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AC053481.4-201ENST00000583164 216 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AL049844.2-201ENST00000604280 628 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 KATNBL1P1-201ENST00000605192 748 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AL354760.1-201ENST00000608357 643 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AL354798.1-201ENST00000622505 329 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AC020923.1-201ENST00000624021 917 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AC020978.9-201ENST00000624380 1141 ntBASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RSPO3Q9BXY4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 AC110792.3-201ENST00000595906 1614 ntBASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 U8.11-201ENST00000384699 133 ntBASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 U8.12-201ENST00000384701 133 ntBASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 MIR449B-201ENST00000384995 97 ntBASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 MIR670-201ENST00000390142 98 ntBASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 HMGB3P20-201ENST00000417997 600 ntBASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.38□□□□□ -1.87
RSPO3Q9BXY4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms