Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 RNU5B-4P-201ENST00000363508 111 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 MIR129-1-201ENST00000384972 72 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 RN7SKP222-201ENST00000410651 315 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 RN7SKP182-201ENST00000410772 298 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 HMGB3P31-201ENST00000413333 595 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC073069.1-201ENST00000428657 441 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 snoU109.3-201ENST00000459477 145 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 RN7SL329P-201ENST00000467740 299 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 RPL7P1-201ENST00000468161 747 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 RPL7P9-201ENST00000468715 747 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 RPL7P24-201ENST00000493052 752 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 TRAV31-201ENST00000502780 342 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC026784.1-201ENST00000507986 352 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 NDUFB4P9-201ENST00000511646 388 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 ARL2BPP6-201ENST00000512757 439 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 RNA5SP309-201ENST00000516670 106 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC091057.3-201ENST00000602684 733 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC006946.3-201ENST00000609791 756 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AL591424.2-201ENST00000617023 128 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AL512427.1-201ENST00000618593 349 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AC018445.2-201ENST00000622987 260 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 MFSD8-220ENST00000641243 1422 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 CCT8P1-201ENST00000413611 1657 ntBASIC3.9□□□□□ -1.78
CCDC28BQ9BUN5 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC28BQ9BUN5 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.9□□□□□ -1.78
CCDC28BQ9BUN5 RARSP1-201ENST00000542842 1418 ntBASIC3.9□□□□□ -1.78
CCDC28BQ9BUN5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 RN7SKP229-201ENST00000410465 302 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC096533.1-201ENST00000411645 353 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC106883.1-201ENST00000418805 562 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 RPL21P109-201ENST00000422213 475 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 FABP5P3-201ENST00000437960 408 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 RPL12P3-201ENST00000440080 396 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AL096803.2-201ENST00000450032 677 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC016724.1-201ENST00000453215 421 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AL513533.1-201ENST00000453728 415 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 DNAJC19P1-201ENST00000455312 319 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC104982.1-201ENST00000478775 574 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 RPL7P47-201ENST00000497299 556 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC008958.1-201ENST00000511047 682 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 RN7SKP60-201ENST00000516985 239 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC118942.1-201ENST00000529674 1035 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AL139174.1-201ENST00000531489 886 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AL389895.1-201ENST00000554127 252 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC099489.2-201ENST00000574976 260 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AP000919.1-202ENST00000581139 1264 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 MIR5684-201ENST00000585074 65 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC012254.4-201ENST00000588843 273 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AL365503.1-201ENST00000605247 905 ntBASIC3.9□□□□□ -1.79
CCDC28BQ9BUN5 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms