Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AL158062.1-201ENST00000619632 745 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 NCAPGP1-201ENST00000505112 1814 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 RNU6-252P-201ENST00000363232 107 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 RNA5SP322-201ENST00000363617 119 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 RNU1-89P-201ENST00000384592 164 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 RNU6-925P-201ENST00000384629 104 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 SNORA11-201ENST00000408789 128 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 RNU2-22P-201ENST00000411266 212 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 AL606495.1-201ENST00000422100 813 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 SDCBPP2-201ENST00000424643 885 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 AC007389.2-201ENST00000434630 306 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 APOOP2-201ENST00000461561 539 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 RPL32P14-201ENST00000463196 378 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 MTCO3P27-201ENST00000514397 196 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 MED28P5-201ENST00000528254 438 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 DUX4L52-201ENST00000549363 777 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 TRAV15-201ENST00000556680 249 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 AC079880.2-201ENST00000603790 1213 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 HMGB1P50-201ENST00000605814 607 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 AF129408.1-201ENST00000608767 431 ntBASIC5.31□□□□□ -1.56
SIN3AQ96ST3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.31□□□□□ -1.56
SIN3AQ96ST3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIN3AQ96ST3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIN3AQ96ST3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIN3AQ96ST3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.3□□□□□ -1.56
SIN3AQ96ST3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.3□□□□□ -1.56
SIN3AQ96ST3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIN3AQ96ST3 SNORD9-201ENST00000362566 104 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.3□□□□□ -1.56
SIN3AQ96ST3 SNORA5A-201ENST00000384111 134 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 MT-TP-201ENST00000387461 68 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC018644.1-201ENST00000429934 551 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 MOB1AP1-201ENST00000430903 535 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.3□□□□□ -1.56
SIN3AQ96ST3 NDUFA5P10-201ENST00000432147 357 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC093716.1-201ENST00000435923 377 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.3□□□□□ -1.56
SIN3AQ96ST3 MTCYBP21-201ENST00000443300 1113 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC002553.2-201ENST00000453217 340 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC069277.2-201ENST00000454211 432 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 RPL23AP12-201ENST00000467573 473 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC121161.1-201ENST00000510606 652 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC104619.4-201ENST00000510773 249 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 MTCYBP19-201ENST00000517463 1124 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC068790.5-201ENST00000602741 355 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC019131.2-201ENST00000609071 870 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC005156.1-201ENST00000613371 573 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC018926.1-201ENST00000616335 435 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 AC112200.1-201ENST00000625015 234 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIN3AQ96ST3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIN3AQ96ST3 LINC00561-201ENST00000565815 2738 ntBASIC5.3□□□□□ -1.56
SIN3AQ96ST3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 AC017007.4-201ENST00000503353 1352 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 ZNF90P1-201ENST00000480493 1951 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 MIR554-201ENST00000384874 96 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 VN1R42P-201ENST00000424651 344 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 MTND4LP13-201ENST00000425022 298 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 ELOCP6-201ENST00000429066 328 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 ELOCP12-201ENST00000458706 328 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms