Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 SNORA7.2-201ENST00000364446 145 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 MIR607-201ENST00000385241 96 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 SDHCP2-201ENST00000398565 501 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 MTCO3P31-201ENST00000405526 789 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AMD1P2-201ENST00000412936 992 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 NANOGP6-201ENST00000429190 847 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VMP1Q96GC9 RNU7-140P-201ENST00000459546 60 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC006463.2-201ENST00000473326 348 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC078785.3-201ENST00000476607 425 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 RPL7P47-201ENST00000497299 556 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC093720.1-201ENST00000505681 714 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC111000.3-201ENST00000508057 576 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC015912.2-201ENST00000571053 181 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC069061.3-201ENST00000582254 823 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC113368.1-201ENST00000603736 382 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AL390816.3-201ENST00000604527 1066 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VMP1Q96GC9 MIR6748-201ENST00000610433 71 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC068722.2-201ENST00000618734 544 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC093875.1-201ENST00000623688 504 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AL121594.5-201ENST00000631724 573 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AF001550.2-201ENST00000636643 217 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 MFSD8-242ENST00000641690 4199 ntBASIC4.3□□□□□ -1.72
VMP1Q96GC9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VMP1Q96GC9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
VMP1Q96GC9 AC135352.1-201ENST00000506173 1418 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VMP1Q96GC9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VMP1Q96GC9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VMP1Q96GC9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
VMP1Q96GC9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 RNU6-335P-201ENST00000364563 113 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 MIR649-201ENST00000384843 97 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 RNA5SP332-201ENST00000391063 115 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 UQCRBP1-201ENST00000421129 336 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 AC009237.2-201ENST00000421358 284 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 AL513174.1-201ENST00000423182 629 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AC234064.1-201ENST00000436312 247 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 RPL7P59-201ENST00000447700 943 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 AC017099.1-201ENST00000448261 1028 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AC011352.3-201ENST00000505162 593 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 RNA5SP446-201ENST00000515955 82 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 MTCYBP41-201ENST00000528913 1123 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AL513477.2-201ENST00000607858 568 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 AC084824.5-201ENST00000612009 413 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 AL133243.1-201ENST00000614487 366 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 AC078880.5-201ENST00000617845 421 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AC098679.5-201ENST00000624394 571 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VMP1Q96GC9 AL592148.3-201ENST00000608771 2646 ntBASIC4.29□□□□□ -1.72
VMP1Q96GC9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VMP1Q96GC9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
VMP1Q96GC9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VMP1Q96GC9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.28□□□□□ -1.72
VMP1Q96GC9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms