Protein–RNA interactions for Protein: Q8NCD3

HJURP, Holliday junction recognition protein, humanhuman

Predicted RBP Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HJURPQ8NCD3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.43□□□□□ -1.7
HJURPQ8NCD3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HJURPQ8NCD3 AL445435.1-201ENST00000604232 665 ntBASIC4.43□□□□□ -1.7
HJURPQ8NCD3 AC021749.1-201ENST00000604322 607 ntBASIC4.43□□□□□ -1.7
HJURPQ8NCD3 AC013244.3-201ENST00000605614 388 ntBASIC4.43□□□□□ -1.7
HJURPQ8NCD3 AC023043.4-201ENST00000612081 449 ntBASIC4.43□□□□□ -1.7
HJURPQ8NCD3 FAM27D1-201ENST00000612308 341 ntBASIC4.43□□□□□ -1.7
HJURPQ8NCD3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HJURPQ8NCD3 AP001002.2-201ENST00000625137 386 ntBASIC4.43□□□□□ -1.7
HJURPQ8NCD3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HJURPQ8NCD3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HJURPQ8NCD3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HJURPQ8NCD3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HJURPQ8NCD3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
HJURPQ8NCD3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
HJURPQ8NCD3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HJURPQ8NCD3 MAPK10-304ENST00000641341 3984 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 RNU1-14P-201ENST00000362759 152 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 RNA5SP22-201ENST00000365393 109 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 SNORA70C-201ENST00000384538 135 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 RNU6-906P-201ENST00000384700 70 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 MIR195-201ENST00000385194 87 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 MIR1911-201ENST00000410783 80 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 RPS3AP25-201ENST00000411660 793 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 HIGD1AP12-201ENST00000427832 281 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 GEMIN8P3-201ENST00000445417 720 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 RPL7P22-201ENST00000466005 733 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC068587.1-201ENST00000483613 781 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC108043.1-201ENST00000512696 574 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 RNU6-311P-201ENST00000516224 102 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 SNORA31.9-201ENST00000516429 84 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 RNA5SP135-201ENST00000517019 125 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 NPM1P6-201ENST00000521088 871 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 OR4C2P-201ENST00000530855 1064 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AP001317.1-201ENST00000531194 960 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 RN7SL176P-201ENST00000580352 264 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC006116.5-201ENST00000591936 559 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AL445363.3-201ENST00000623080 671 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC124312.6-202ENST00000623624 418 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AC090897.3-201ENST00000636973 1157 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 AP001273.1-201ENST00000624493 3152 ntBASIC4.42□□□□□ -1.7
HJURPQ8NCD3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HJURPQ8NCD3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.41□□□□□ -1.7
HJURPQ8NCD3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HJURPQ8NCD3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.41□□□□□ -1.7
HJURPQ8NCD3 LARP1BP1-201ENST00000506036 1359 ntBASIC4.41□□□□□ -1.7
HJURPQ8NCD3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HJURPQ8NCD3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HJURPQ8NCD3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HJURPQ8NCD3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HJURPQ8NCD3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HJURPQ8NCD3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
HJURPQ8NCD3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HJURPQ8NCD3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.41□□□□□ -1.7
HJURPQ8NCD3 RNU4-44P-201ENST00000363050 141 ntBASIC4.41□□□□□ -1.7
HJURPQ8NCD3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HJURPQ8NCD3 AL161909.1-201ENST00000397390 712 ntBASIC4.41□□□□□ -1.7
HJURPQ8NCD3 RNA5SP36-201ENST00000410197 133 ntBASIC4.41□□□□□ -1.7
HJURPQ8NCD3 RN7SKP235-201ENST00000410662 305 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms