Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AL807761.1-201ENST00000417622 171 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC019097.1-201ENST00000424783 735 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 BNIP3P2-201ENST00000441221 577 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 Y_RNA.632-201ENST00000459189 102 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 MRPS17P3-201ENST00000465453 385 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 RPS4XP18-201ENST00000495480 763 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 SUMO2P4-201ENST00000504193 276 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 RNU6-1170P-201ENST00000515974 106 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AP005597.4-201ENST00000526762 229 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC123904.2-201ENST00000548059 300 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 BNIP3P6-201ENST00000549284 499 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC007956.1-201ENST00000555623 542 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 TXNP4-201ENST00000575018 310 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 MIR3118-1-201ENST00000581787 76 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC115085.1-201ENST00000588924 229 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC010525.2-201ENST00000590920 195 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AL136131.3-201ENST00000607600 188 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC130324.3-201ENST00000614165 542 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC091953.2-201ENST00000623979 160 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 CAP1P2-201ENST00000417455 1409 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AL592429.1-201ENST00000403909 1473 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC114546.3-201ENST00000623582 1734 ntBASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
UBE3DQ7Z6J8 AC011933.2-201ENST00000578539 2790 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 AC083837.1-201ENST00000565297 2994 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 NACAP2-201ENST00000318548 624 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 AL161781.1-201ENST00000354277 403 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 RNA5SP477-201ENST00000362639 119 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 RN7SKP128-201ENST00000364270 303 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 Y_RNA.255-201ENST00000364581 97 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 RNU6-169P-201ENST00000365336 107 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 Y_RNA.381-201ENST00000365666 102 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 RNU6-606P-201ENST00000384721 111 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 PRRC2CP1-201ENST00000404428 159 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 AC078974.1-201ENST00000411597 223 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 RPL26P29-201ENST00000415623 438 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 AC048351.1-201ENST00000420064 602 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 AC137499.1-201ENST00000427602 88 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 BRK1P2-201ENST00000442875 223 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 BX842559.2-201ENST00000451418 605 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 RPL7P39-201ENST00000481157 744 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 CR383656.1-201ENST00000484916 377 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 RN7SL649P-201ENST00000496974 275 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 TXNP6-201ENST00000510190 310 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 NPM1P41-201ENST00000512920 831 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 RN7SKP67-201ENST00000515905 235 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 RN7SKP116-201ENST00000516902 319 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 RNU6-410P-201ENST00000517006 107 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 AC090572.1-201ENST00000519251 160 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 TRMT10BP1-201ENST00000519377 943 ntBASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.61□□□□□ -1.51
UBE3DQ7Z6J8 AC022616.3-201ENST00000523940 148 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms