Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MIR1282-201ENST00000408865 101 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 RN7SKP182-201ENST00000410772 298 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 HSFY4P-201ENST00000415994 1181 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 OR51AB1P-201ENST00000429046 620 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 PSMA2P3-201ENST00000429685 675 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 CLUHP1-201ENST00000435012 1190 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 GSTA7P-201ENST00000438425 448 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 BX842559.2-201ENST00000451418 605 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 YWHAEP1-201ENST00000453697 763 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 USP9YP34-201ENST00000453983 808 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC108161.1-201ENST00000461060 402 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 PLGLA-201ENST00000465668 449 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 PABPC1P3-201ENST00000469174 459 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 PPIAP19-201ENST00000486414 492 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC020890.1-201ENST00000491837 504 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 OR5BC1P-201ENST00000529327 739 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 OR4G1P-201ENST00000588632 938 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC004223.2-201ENST00000590309 544 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AL031985.2-201ENST00000600955 480 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 RPL23AP92-201ENST00000603609 255 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AL022161.1-201ENST00000604390 213 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC025588.4-201ENST00000615802 908 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC108359.1-201ENST00000616451 1211 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC126175.1-201ENST00000617041 758 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC092192.1-201ENST00000633154 1018 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC074101.1-201ENST00000637861 241 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC068137.4-201ENST00000638485 296 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AC006927.3-201ENST00000638789 384 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 NCLP2-201ENST00000416078 1462 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 MTCO1P23-201ENST00000415223 1526 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 EIF2AP4-201ENST00000424793 1781 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AL139811.1-201ENST00000424779 2299 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 RNU6-433P-201ENST00000363216 104 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 RNU6-660P-201ENST00000364566 109 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AL121834.1-202ENST00000404494 277 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AL390316.1-201ENST00000406279 553 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 OR4K12P-201ENST00000406538 961 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 RNA5SP178-201ENST00000410380 128 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AL035410.1-201ENST00000427409 427 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 SNRPEP7-201ENST00000438350 220 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 RPL36AP15-201ENST00000444514 266 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 RNU7-136P-201ENST00000458819 69 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 RN7SL189P-201ENST00000468631 289 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AC073073.1-201ENST00000493920 463 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AC082651.2-201ENST00000496833 166 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms