Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SNORA11.1-201ENST00000408133 129 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 SNORA3C-201ENST00000408792 125 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 AC092647.1-201ENST00000420654 287 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 HMGB1P37-201ENST00000439613 609 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 HMGB1P26-201ENST00000452520 628 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 AC018635.1-201ENST00000468292 1030 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 RPL31P61-201ENST00000496160 376 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 AC093770.1-201ENST00000511559 571 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 NOP56P3-201ENST00000549457 385 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 CR589904.2-201ENST00000612533 440 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 CR392039.4-201ENST00000624968 501 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 MIR3074-201ENST00000384885 81 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 MIR199A2-201ENST00000385289 110 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 AL603766.1-201ENST00000407763 664 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 ELOCP6-201ENST00000429066 328 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 MTND4LP14-201ENST00000429447 288 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 SNORA71B-202ENST00000439232 272 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 RPS15AP29-201ENST00000445539 400 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 ELOCP12-201ENST00000458706 328 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 AC092045.1-201ENST00000495716 1231 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 AC108157.1-201ENST00000510511 539 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 PPBPP1-201ENST00000510807 373 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 RNU6-1308P-201ENST00000516817 103 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 IGLVIV-53-201ENST00000520107 367 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 OR4A12P-201ENST00000530847 918 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 AL049870.4-201ENST00000555741 486 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 AC106785.3-201ENST00000564064 847 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 AC012603.1-201ENST00000606424 528 ntBASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM1Q2M3G4 MAPK10-372ENST00000641954 3413 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 MIR124-3-201ENST00000384866 87 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AL356057.1-202ENST00000402263 756 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 MIR1251-201ENST00000408552 70 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AC105402.1-201ENST00000413336 545 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 RPL31P45-201ENST00000419532 356 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 RPL7P4-203ENST00000430239 730 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AP000926.1-201ENST00000479573 241 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AC006499.5-201ENST00000505037 514 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 SNX5P1-201ENST00000505757 1041 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AC110768.1-201ENST00000509222 400 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 MTND2P31-201ENST00000512602 616 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 CKS1BP1-201ENST00000555221 240 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AC067852.4-201ENST00000590314 478 ntBASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.47□□□□□ -1.69
SHROOM1Q2M3G4 C2orf27A-204ENST00000623058 969 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms