Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGCS1Q01581 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGCS1Q01581 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HMGCS1Q01581 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS1Q01581 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS1Q01581 AL589826.1-201ENST00000340697 249 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS1Q01581 Z86062.1-201ENST00000406773 777 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 RANP4-201ENST00000413361 655 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS1Q01581 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC092017.2-201ENST00000427600 362 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 MOB1AP1-201ENST00000430903 535 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 ZFAND6P1-201ENST00000434138 605 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 MTND2P21-201ENST00000436242 1042 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 SNRPGP5-201ENST00000456003 220 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC018635.1-201ENST00000468292 1030 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 RN7SL323P-201ENST00000494712 295 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC022790.1-201ENST00000522872 204 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC008011.1-201ENST00000545989 227 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 AL121576.1-201ENST00000556055 276 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC006960.3-201ENST00000561845 705 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC015911.5-201ENST00000587076 451 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC005255.1-201ENST00000593748 216 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC012557.1-201ENST00000607115 611 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS1Q01581 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC244205.2-202ENST00000635781 342 ntBASIC3.59□□□□□ -1.83
HMGCS1Q01581 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGCS1Q01581 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS1Q01581 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS1Q01581 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HMGCS1Q01581 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
HMGCS1Q01581 AC100871.1-201ENST00000507871 1456 ntBASIC3.59□□□□□ -1.84
HMGCS1Q01581 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
HMGCS1Q01581 AL031985.3-201ENST00000565390 2449 ntBASIC3.59□□□□□ -1.84
HMGCS1Q01581 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HMGCS1Q01581 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGCS1Q01581 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGCS1Q01581 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGCS1Q01581 RN7SKP280-201ENST00000364196 304 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HMGCS1Q01581 RNA5SP424-201ENST00000390988 115 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 AL391417.1-201ENST00000404100 426 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 ZNF602P-201ENST00000405929 924 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 RNA5SP498-201ENST00000411342 120 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 HMGB3P20-201ENST00000417997 600 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 AL691517.1-201ENST00000440833 1235 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 XKRY2-201ENST00000442362 1093 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 AC006480.1-201ENST00000449887 378 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 MTCO3P16-201ENST00000454456 754 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 AC025181.1-201ENST00000477507 416 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 SUMO1P1-201ENST00000497904 306 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 NOP56P3-201ENST00000549457 385 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.58□□□□□ -1.84
HMGCS1Q01581 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGCS1Q01581 RN7SL703P-201ENST00000578485 302 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms