Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC242843.1-201ENST00000618702 573 ntBASIC3.32□□□□□ -1.88
ACTBP60709 MIR8059-201ENST00000620427 81 ntBASIC3.32□□□□□ -1.88
ACTBP60709 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.32□□□□□ -1.88
ACTBP60709 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ACTBP60709 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.32□□□□□ -1.88
ACTBP60709 AC021755.1-201ENST00000559747 1447 ntBASIC3.32□□□□□ -1.88
ACTBP60709 MTCO1P8-201ENST00000416914 1523 ntBASIC3.32□□□□□ -1.88
ACTBP60709 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ACTBP60709 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.31□□□□□ -1.88
ACTBP60709 AC007256.1-201ENST00000392253 2765 ntBASIC3.31□□□□□ -1.88
ACTBP60709 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ACTBP60709 AC116096.1-201ENST00000566804 2314 ntBASIC3.31□□□□□ -1.88
ACTBP60709 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ACTBP60709 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.31□□□□□ -1.88
ACTBP60709 SNORA51.2-201ENST00000364595 132 ntBASIC3.31□□□□□ -1.88
ACTBP60709 SNORA62-201ENST00000365493 153 ntBASIC3.31□□□□□ -1.88
ACTBP60709 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ACTBP60709 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ACTBP60709 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
ACTBP60709 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.31□□□□□ -1.88
ACTBP60709 TCEA1P2-201ENST00000420496 906 ntBASIC3.31□□□□□ -1.88
ACTBP60709 OR5BE1P-201ENST00000425977 939 ntBASIC3.31□□□□□ -1.88
ACTBP60709 AC016712.1-201ENST00000431088 378 ntBASIC3.31□□□□□ -1.88
ACTBP60709 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ACTBP60709 NEK4P1-201ENST00000433383 879 ntBASIC3.31□□□□□ -1.88
ACTBP60709 RPS29P31-201ENST00000446147 164 ntBASIC3.31□□□□□ -1.88
ACTBP60709 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.31□□□□□ -1.88
ACTBP60709 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.31□□□□□ -1.88
ACTBP60709 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.31□□□□□ -1.88
ACTBP60709 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.31□□□□□ -1.88
ACTBP60709 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
ACTBP60709 AC093267.1-201ENST00000489176 961 ntBASIC3.31□□□□□ -1.88
ACTBP60709 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ACTBP60709 RN7SL604P-201ENST00000492589 296 ntBASIC3.31□□□□□ -1.88
ACTBP60709 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ACTBP60709 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.31□□□□□ -1.88
ACTBP60709 ARL2BPP6-201ENST00000512757 439 ntBASIC3.31□□□□□ -1.88
ACTBP60709 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.31□□□□□ -1.88
ACTBP60709 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.31□□□□□ -1.88
ACTBP60709 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.31□□□□□ -1.88
ACTBP60709 OR8L1P-201ENST00000534005 955 ntBASIC3.31□□□□□ -1.88
ACTBP60709 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.31□□□□□ -1.88
ACTBP60709 CYP2C60P-201ENST00000566088 139 ntBASIC3.31□□□□□ -1.88
ACTBP60709 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.31□□□□□ -1.88
ACTBP60709 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.31□□□□□ -1.88
ACTBP60709 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ACTBP60709 MIR4697-201ENST00000582977 78 ntBASIC3.31□□□□□ -1.88
ACTBP60709 AC022146.1-201ENST00000595307 847 ntBASIC3.31□□□□□ -1.88
ACTBP60709 AL445423.1-201ENST00000609941 536 ntBASIC3.31□□□□□ -1.88
ACTBP60709 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
ACTBP60709 MLECP1-201ENST00000615893 709 ntBASIC3.31□□□□□ -1.88
ACTBP60709 MIR7151-201ENST00000617477 60 ntBASIC3.31□□□□□ -1.88
ACTBP60709 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.31□□□□□ -1.88
ACTBP60709 OR5BE1P-202ENST00000641168 1176 ntBASIC3.31□□□□□ -1.88
ACTBP60709 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ACTBP60709 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ACTBP60709 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ACTBP60709 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
ACTBP60709 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ACTBP60709 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
ACTBP60709 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
ACTBP60709 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
ACTBP60709 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.3□□□□□ -1.88
ACTBP60709 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.3□□□□□ -1.88
ACTBP60709 AC092326.2-201ENST00000624772 1561 ntBASIC3.3□□□□□ -1.88
ACTBP60709 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.3□□□□□ -1.88
ACTBP60709 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
ACTBP60709 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ACTBP60709 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.3□□□□□ -1.88
ACTBP60709 AL672296.1-201ENST00000427780 2158 ntBASIC3.3□□□□□ -1.88
ACTBP60709 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
ACTBP60709 RPL32P3-201ENST00000359025 275 ntBASIC3.3□□□□□ -1.88
ACTBP60709 SNORA7.2-201ENST00000364446 145 ntBASIC3.3□□□□□ -1.88
ACTBP60709 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.3□□□□□ -1.88
ACTBP60709 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.3□□□□□ -1.88
ACTBP60709 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
ACTBP60709 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ACTBP60709 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ACTBP60709 AL391417.1-201ENST00000404100 426 ntBASIC3.3□□□□□ -1.88
ACTBP60709 RN7SKP285-201ENST00000410137 318 ntBASIC3.3□□□□□ -1.88
ACTBP60709 SNORA57.3-201ENST00000411095 141 ntBASIC3.3□□□□□ -1.88
ACTBP60709 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ACTBP60709 AC108032.1-201ENST00000416706 207 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AIMP1P1-201ENST00000418670 937 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.3□□□□□ -1.88
ACTBP60709 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.3□□□□□ -1.88
ACTBP60709 MOB1AP1-201ENST00000430903 535 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.3□□□□□ -1.88
ACTBP60709 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.3□□□□□ -1.88
ACTBP60709 SNORA71B-202ENST00000439232 272 ntBASIC3.3□□□□□ -1.88
ACTBP60709 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.3□□□□□ -1.88
ACTBP60709 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.3□□□□□ -1.88
ACTBP60709 RANP8-201ENST00000444720 713 ntBASIC3.3□□□□□ -1.88
ACTBP60709 NUTF2P3-201ENST00000448540 384 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AC004801.2-202ENST00000463559 283 ntBASIC3.3□□□□□ -1.88
ACTBP60709 RPS27AP13-201ENST00000498403 237 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.3□□□□□ -1.88
ACTBP60709 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.3□□□□□ -1.88
ACTBP60709 AC108043.1-201ENST00000512696 574 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AC093755.1-201ENST00000512950 1023 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms