Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SETP14-201ENST00000497538 873 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGCS2P54868 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.26□□□□□ -1.73
HMGCS2P54868 SCARNA13-201ENST00000516672 275 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 OR4V1P-201ENST00000525394 1140 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS2P54868 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGCS2P54868 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGCS2P54868 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.26□□□□□ -1.73
HMGCS2P54868 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.26□□□□□ -1.73
HMGCS2P54868 BMS1P7-201ENST00000602440 1052 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 AC123786.2-201ENST00000603459 275 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 OR2BH1P-201ENST00000608850 864 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 AC128687.2-201ENST00000609657 566 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 UBE3AP2-201ENST00000429033 2259 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 AC009229.4-201ENST00000623854 1947 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 AL451142.2-201ENST00000429076 2090 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS2P54868 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.26□□□□□ -1.73
HMGCS2P54868 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS2P54868 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HMGCS2P54868 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS2P54868 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS2P54868 PHKBP1-201ENST00000450951 1951 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 ASNSP1-201ENST00000518311 1939 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
HMGCS2P54868 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCS2P54868 Z92545.1-201ENST00000411782 234 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCS2P54868 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCS2P54868 BX842559.1-201ENST00000419615 532 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 AC012497.1-201ENST00000429392 575 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 AC007563.3-201ENST00000433233 371 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCS2P54868 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGCS2P54868 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGCS2P54868 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCS2P54868 CYCSP32-201ENST00000440548 321 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGCS2P54868 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCS2P54868 AC006480.1-201ENST00000449887 378 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGCS2P54868 AC104629.2-201ENST00000468627 598 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 RN7SL601P-201ENST00000471221 293 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCS2P54868 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCS2P54868 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.25□□□□□ -1.73
HMGCS2P54868 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGCS2P54868 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
HMGCS2P54868 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCS2P54868 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGCS2P54868 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCS2P54868 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGCS2P54868 AC006116.10-201ENST00000591836 581 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 AL512506.1-201ENST00000613918 449 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 MIR8058-201ENST00000615737 89 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 AL355365.1-201ENST00000616480 294 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 AC019080.5-201ENST00000624891 757 ntBASIC4.25□□□□□ -1.73
HMGCS2P54868 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HMGCS2P54868 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGCS2P54868 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCS2P54868 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HMGCS2P54868 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCS2P54868 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGCS2P54868 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HMGCS2P54868 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCS2P54868 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCS2P54868 OR6K3-202ENST00000368146 996 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGCS2P54868 SNORA11C-201ENST00000408532 129 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 AC073136.2-201ENST00000417282 849 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 DBIP2-201ENST00000419076 262 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCS2P54868 RPS20P1-201ENST00000434853 354 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 AC096638.2-201ENST00000434965 711 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 MTCYBP29-201ENST00000436327 1006 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 AP000949.1-201ENST00000438328 629 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 AC074367.1-201ENST00000438685 1125 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 AC092013.1-201ENST00000438795 332 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 RPL26P28-201ENST00000451325 435 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 RPL21P10-201ENST00000463521 490 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 AP000563.1-201ENST00000490865 758 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 AC090543.1-201ENST00000492168 485 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 AC026784.1-201ENST00000507986 352 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGCS2P54868 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGCS2P54868 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGCS2P54868 UBTFL9-201ENST00000534504 1148 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 CKS1BP1-201ENST00000555221 240 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGCS2P54868 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGCS2P54868 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGCS2P54868 AC090079.2-201ENST00000575289 768 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 AC011471.1-201ENST00000585766 187 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 AC007423.1-201ENST00000605009 627 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 AC005014.3-201ENST00000605985 190 ntBASIC4.24□□□□□ -1.73
HMGCS2P54868 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGCS2P54868 AP006248.3-201ENST00000623580 594 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms