Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN3P54252 DDX39BP2-208ENST00000453923 258 ntBASIC4.24□□□□□ -1.73
ATXN3P54252 MTND2P30-201ENST00000456663 382 ntBASIC4.24□□□□□ -1.73
ATXN3P54252 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN3P54252 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.24□□□□□ -1.73
ATXN3P54252 RPL23AP73-201ENST00000492507 471 ntBASIC4.24□□□□□ -1.73
ATXN3P54252 RN7SL691P-201ENST00000494487 301 ntBASIC4.24□□□□□ -1.73
ATXN3P54252 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.24□□□□□ -1.73
ATXN3P54252 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN3P54252 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.24□□□□□ -1.73
ATXN3P54252 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ATXN3P54252 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.24□□□□□ -1.73
ATXN3P54252 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.24□□□□□ -1.73
ATXN3P54252 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN3P54252 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.24□□□□□ -1.73
ATXN3P54252 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN3P54252 OSBPL9P3-201ENST00000534523 595 ntBASIC4.24□□□□□ -1.73
ATXN3P54252 AC139103.1-201ENST00000534696 1030 ntBASIC4.24□□□□□ -1.73
ATXN3P54252 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN3P54252 AL442163.2-201ENST00000553912 710 ntBASIC4.24□□□□□ -1.73
ATXN3P54252 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN3P54252 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN3P54252 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN3P54252 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN3P54252 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN3P54252 EIF1P6-201ENST00000600054 334 ntBASIC4.24□□□□□ -1.73
ATXN3P54252 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.24□□□□□ -1.73
ATXN3P54252 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN3P54252 CR392039.5-201ENST00000623201 510 ntBASIC4.24□□□□□ -1.73
ATXN3P54252 AC138907.10-201ENST00000623708 983 ntBASIC4.24□□□□□ -1.73
ATXN3P54252 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.24□□□□□ -1.73
ATXN3P54252 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATXN3P54252 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATXN3P54252 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.24□□□□□ -1.73
ATXN3P54252 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.24□□□□□ -1.73
ATXN3P54252 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ATXN3P54252 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.24□□□□□ -1.73
ATXN3P54252 AC017007.4-201ENST00000503353 1352 ntBASIC4.24□□□□□ -1.73
ATXN3P54252 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATXN3P54252 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
ATXN3P54252 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ATXN3P54252 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3P54252 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ATXN3P54252 AC104446.1-201ENST00000613728 1321 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3P54252 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3P54252 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3P54252 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ATXN3P54252 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
ATXN3P54252 RN7SKP177-201ENST00000410567 355 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN3P54252 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN3P54252 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.23□□□□□ -1.73
ATXN3P54252 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.23□□□□□ -1.73
ATXN3P54252 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.23□□□□□ -1.73
ATXN3P54252 AC018644.1-201ENST00000429934 551 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 RPL23AP83-201ENST00000434984 473 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 RPL23AP46-201ENST00000438548 490 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.23□□□□□ -1.73
ATXN3P54252 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.23□□□□□ -1.73
ATXN3P54252 AC089999.1-201ENST00000460336 374 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 RPL37P6-202ENST00000464216 403 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3P54252 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.23□□□□□ -1.73
ATXN3P54252 AC133963.2-201ENST00000513686 578 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 AC099522.1-202ENST00000514718 367 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.23□□□□□ -1.73
ATXN3P54252 AC069240.1-201ENST00000548774 375 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.23□□□□□ -1.73
ATXN3P54252 CENPUP2-201ENST00000555897 1186 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
ATXN3P54252 AC017104.5-201ENST00000637647 639 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3P54252 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN3P54252 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3P54252 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3P54252 MTCO1P14-201ENST00000441695 1559 ntBASIC4.23□□□□□ -1.73
ATXN3P54252 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN3P54252 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN3P54252 AL627171.1-201ENST00000618845 1308 ntBASIC4.22□□□□□ -1.73
ATXN3P54252 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.22□□□□□ -1.73
ATXN3P54252 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN3P54252 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.22□□□□□ -1.73
ATXN3P54252 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN3P54252 AL356489.2-201ENST00000566968 3528 ntBASIC4.22□□□□□ -1.73
ATXN3P54252 RNU6-650P-201ENST00000365658 111 ntBASIC4.22□□□□□ -1.73
ATXN3P54252 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN3P54252 SNORA70E-201ENST00000384492 135 ntBASIC4.22□□□□□ -1.73
ATXN3P54252 MIR7-3-201ENST00000384898 110 ntBASIC4.22□□□□□ -1.73
ATXN3P54252 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN3P54252 RPL23AP48-201ENST00000406913 488 ntBASIC4.22□□□□□ -1.73
ATXN3P54252 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.22□□□□□ -1.73
ATXN3P54252 RN7SKP235-201ENST00000410662 305 ntBASIC4.22□□□□□ -1.73
ATXN3P54252 MIR1911-201ENST00000410783 80 ntBASIC4.22□□□□□ -1.73
ATXN3P54252 RNA5SP104-201ENST00000410989 118 ntBASIC4.22□□□□□ -1.73
ATXN3P54252 RNA5SP39-201ENST00000411245 120 ntBASIC4.22□□□□□ -1.73
ATXN3P54252 AL139095.3-201ENST00000419672 1203 ntBASIC4.22□□□□□ -1.73
ATXN3P54252 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.22□□□□□ -1.73
ATXN3P54252 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms