Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
COPB1P53618 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COPB1P53618 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COPB1P53618 RNA5SP307-201ENST00000362863 116 ntBASIC4.92□□□□□ -1.62
COPB1P53618 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.92□□□□□ -1.62
COPB1P53618 SNORA56-201ENST00000383966 129 ntBASIC4.92□□□□□ -1.62
COPB1P53618 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.92□□□□□ -1.62
COPB1P53618 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.92□□□□□ -1.62
COPB1P53618 RNU6-757P-201ENST00000410334 100 ntBASIC4.92□□□□□ -1.62
COPB1P53618 BTF3L4P1-201ENST00000413813 468 ntBASIC4.92□□□□□ -1.62
COPB1P53618 CYCSP10-201ENST00000417973 294 ntBASIC4.92□□□□□ -1.62
COPB1P53618 PAICSP7-201ENST00000419829 962 ntBASIC4.92□□□□□ -1.62
COPB1P53618 AL358176.3-201ENST00000420757 454 ntBASIC4.92□□□□□ -1.62
COPB1P53618 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.92□□□□□ -1.62
COPB1P53618 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.92□□□□□ -1.62
COPB1P53618 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.92□□□□□ -1.62
COPB1P53618 MTCO1P3-201ENST00000429327 192 ntBASIC4.92□□□□□ -1.62
COPB1P53618 AC096638.2-201ENST00000434965 711 ntBASIC4.92□□□□□ -1.62
COPB1P53618 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.92□□□□□ -1.62
COPB1P53618 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COPB1P53618 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.92□□□□□ -1.62
COPB1P53618 AC097262.1-201ENST00000452559 548 ntBASIC4.92□□□□□ -1.62
COPB1P53618 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.92□□□□□ -1.62
COPB1P53618 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.92□□□□□ -1.62
COPB1P53618 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.92□□□□□ -1.62
COPB1P53618 RN7SL738P-201ENST00000470264 297 ntBASIC4.92□□□□□ -1.62
COPB1P53618 GAPDHP39-201ENST00000481866 979 ntBASIC4.92□□□□□ -1.62
COPB1P53618 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.92□□□□□ -1.62
COPB1P53618 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
COPB1P53618 MTCYBP16-201ENST00000509187 1129 ntBASIC4.92□□□□□ -1.62
COPB1P53618 AC116353.3-201ENST00000511215 249 ntBASIC4.92□□□□□ -1.62
COPB1P53618 RNU6-759P-201ENST00000516740 103 ntBASIC4.92□□□□□ -1.62
COPB1P53618 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.92□□□□□ -1.62
COPB1P53618 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.92□□□□□ -1.62
COPB1P53618 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.92□□□□□ -1.62
COPB1P53618 POLR2KP1-201ENST00000553226 168 ntBASIC4.92□□□□□ -1.62
COPB1P53618 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.92□□□□□ -1.62
COPB1P53618 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COPB1P53618 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.92□□□□□ -1.62
COPB1P53618 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.92□□□□□ -1.62
COPB1P53618 AL121834.1-201ENST00000572284 509 ntBASIC4.92□□□□□ -1.62
COPB1P53618 AC022069.1-201ENST00000582910 658 ntBASIC4.92□□□□□ -1.62
COPB1P53618 MIR4999-201ENST00000585029 91 ntBASIC4.92□□□□□ -1.62
COPB1P53618 AC096553.1-201ENST00000605169 829 ntBASIC4.92□□□□□ -1.62
COPB1P53618 AC090525.3-201ENST00000605601 189 ntBASIC4.92□□□□□ -1.62
COPB1P53618 AC023158.2-201ENST00000614876 543 ntBASIC4.92□□□□□ -1.62
COPB1P53618 AC022509.4-201ENST00000621404 572 ntBASIC4.92□□□□□ -1.62
COPB1P53618 AC007546.2-201ENST00000623996 360 ntBASIC4.92□□□□□ -1.62
COPB1P53618 AC091965.5-201ENST00000624785 342 ntBASIC4.92□□□□□ -1.62
COPB1P53618 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.92□□□□□ -1.62
COPB1P53618 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.92□□□□□ -1.62
COPB1P53618 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.92□□□□□ -1.62
COPB1P53618 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
COPB1P53618 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
COPB1P53618 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COPB1P53618 ZNF542P-204ENST00000482727 1305 ntBASIC4.92□□□□□ -1.62
COPB1P53618 AC125257.1-201ENST00000560400 2930 ntBASIC4.92□□□□□ -1.62
COPB1P53618 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COPB1P53618 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COPB1P53618 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.91□□□□□ -1.62
COPB1P53618 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.91□□□□□ -1.62
COPB1P53618 AC005332.5-201ENST00000591222 2919 ntBASIC4.91□□□□□ -1.62
COPB1P53618 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
COPB1P53618 AC010928.1-201ENST00000592477 1447 ntBASIC4.91□□□□□ -1.62
COPB1P53618 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.91□□□□□ -1.62
COPB1P53618 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
COPB1P53618 RNU6-553P-201ENST00000364047 96 ntBASIC4.91□□□□□ -1.62
COPB1P53618 SNORA62.2-201ENST00000364672 152 ntBASIC4.91□□□□□ -1.62
COPB1P53618 AL136131.1-201ENST00000406079 803 ntBASIC4.91□□□□□ -1.62
COPB1P53618 SNORA11C-201ENST00000408532 129 ntBASIC4.91□□□□□ -1.62
COPB1P53618 GSTM3P2-201ENST00000412746 530 ntBASIC4.91□□□□□ -1.62
COPB1P53618 FAR2P2-201ENST00000413041 594 ntBASIC4.91□□□□□ -1.62
COPB1P53618 AC098592.1-201ENST00000419352 333 ntBASIC4.91□□□□□ -1.62
COPB1P53618 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.91□□□□□ -1.62
COPB1P53618 AC007435.1-201ENST00000421086 415 ntBASIC4.91□□□□□ -1.62
COPB1P53618 EIF4EP1-201ENST00000422311 642 ntBASIC4.91□□□□□ -1.62
COPB1P53618 FAR2P4-202ENST00000425399 584 ntBASIC4.91□□□□□ -1.62
COPB1P53618 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.91□□□□□ -1.62
COPB1P53618 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.91□□□□□ -1.62
COPB1P53618 USP9YP9-201ENST00000429406 715 ntBASIC4.91□□□□□ -1.62
COPB1P53618 RPEP2-201ENST00000432149 701 ntBASIC4.91□□□□□ -1.62
COPB1P53618 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.91□□□□□ -1.62
COPB1P53618 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.91□□□□□ -1.62
COPB1P53618 RPL23AP93-201ENST00000440847 484 ntBASIC4.91□□□□□ -1.62
COPB1P53618 ATP5C1P1-201ENST00000441945 895 ntBASIC4.91□□□□□ -1.62
COPB1P53618 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.91□□□□□ -1.62
COPB1P53618 MTCYBP3-201ENST00000445588 1137 ntBASIC4.91□□□□□ -1.62
COPB1P53618 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.91□□□□□ -1.62
COPB1P53618 AC012671.1-201ENST00000451912 203 ntBASIC4.91□□□□□ -1.62
COPB1P53618 RPL21P134-201ENST00000453468 483 ntBASIC4.91□□□□□ -1.62
COPB1P53618 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.91□□□□□ -1.62
COPB1P53618 AL109741.2-201ENST00000455561 343 ntBASIC4.91□□□□□ -1.62
COPB1P53618 CCDC75P1-201ENST00000469247 791 ntBASIC4.91□□□□□ -1.62
COPB1P53618 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
COPB1P53618 BZW1P2-201ENST00000473537 826 ntBASIC4.91□□□□□ -1.62
COPB1P53618 LINC00888-204ENST00000487386 421 ntBASIC4.91□□□□□ -1.62
COPB1P53618 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.91□□□□□ -1.62
COPB1P53618 PPBPP1-201ENST00000510807 373 ntBASIC4.91□□□□□ -1.62
COPB1P53618 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.91□□□□□ -1.62
COPB1P53618 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms