Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC115115.1-201ENST00000449927 248 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR2JP52435 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR2JP52435 PLGLA-201ENST00000465668 449 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 AC007537.2-201ENST00000472093 511 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 AC005726.1-201ENST00000494679 427 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
POLR2JP52435 FCF1P8-201ENST00000510322 597 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.17□□□□□ -1.9
POLR2JP52435 AC103843.2-201ENST00000530523 682 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
POLR2JP52435 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
POLR2JP52435 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.17□□□□□ -1.9
POLR2JP52435 AC037471.2-201ENST00000564941 598 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
POLR2JP52435 AC005972.3-201ENST00000606304 481 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 AC127502.3-201ENST00000636170 1206 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.17□□□□□ -1.9
POLR2JP52435 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
POLR2JP52435 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
POLR2JP52435 AL356274.2-201ENST00000624379 3752 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
POLR2JP52435 AL365440.1-201ENST00000436135 2167 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
POLR2JP52435 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
POLR2JP52435 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
POLR2JP52435 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
POLR2JP52435 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR2JP52435 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR2JP52435 RAD1P1-201ENST00000231383 813 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 XIAPP3-201ENST00000312918 795 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.16□□□□□ -1.9
POLR2JP52435 RNU6-1320P-201ENST00000390838 107 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 RNU6-1269P-201ENST00000391139 107 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
POLR2JP52435 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
POLR2JP52435 SEC63P1-201ENST00000425785 1258 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
POLR2JP52435 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR2JP52435 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR2JP52435 RNU6-599P-201ENST00000459383 107 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 RNU6-1193P-201ENST00000459461 107 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 AC104849.1-201ENST00000462623 405 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR2JP52435 AP000926.1-201ENST00000479573 241 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 AC025518.1-201ENST00000479856 347 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.16□□□□□ -1.9
POLR2JP52435 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR2JP52435 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR2JP52435 SNORA70.17-201ENST00000516449 133 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 AP001207.2-201ENST00000519490 539 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR2JP52435 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
POLR2JP52435 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.16□□□□□ -1.9
POLR2JP52435 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR2JP52435 AC005476.1-201ENST00000554427 397 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR2JP52435 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR2JP52435 MIR3186-201ENST00000577404 85 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 AC067959.1-201ENST00000604334 379 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 AC015802.5-201ENST00000607478 399 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 RNU6-368P-201ENST00000620928 107 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 RNU6-538P-201ENST00000622329 107 ntBASIC3.16□□□□□ -1.9
POLR2JP52435 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
POLR2JP52435 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
POLR2JP52435 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
POLR2JP52435 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
POLR2JP52435 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.15□□□□□ -1.9
POLR2JP52435 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.15□□□□□ -1.9
POLR2JP52435 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.15□□□□□ -1.9
POLR2JP52435 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR2JP52435 SNORD17-201ENST00000390930 237 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 AL583834.1-201ENST00000406943 343 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 AC007899.1-201ENST00000412776 775 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR2JP52435 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.15□□□□□ -1.91
POLR2JP52435 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR2JP52435 AC004975.1-201ENST00000428733 208 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 ATP5JP1-201ENST00000431631 322 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR2JP52435 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR2JP52435 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR2JP52435 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR2JP52435 AC091564.1-201ENST00000464563 479 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 CDH12P2-201ENST00000504393 298 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 RN7SKP13-201ENST00000515933 244 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 AC245166.1-201ENST00000521012 253 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR2JP52435 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR2JP52435 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR2JP52435 AC136624.4-201ENST00000573044 370 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR2JP52435 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.15□□□□□ -1.91
POLR2JP52435 AC017076.1-201ENST00000607613 578 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 AC092653.1-201ENST00000608509 531 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR2JP52435 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR2JP52435 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR2JP52435 AC091903.1-201ENST00000624322 454 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms