Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RNA5SP49-201ENST00000516450 115 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 RNA5SP519-201ENST00000516480 119 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 RN7SKP287-201ENST00000516546 266 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 RNA5SP360-201ENST00000516555 118 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC6A12P48065 OR5M7P-201ENST00000526140 972 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 AC009643.1-201ENST00000532030 391 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC6A12P48065 OR8K4P-201ENST00000534608 872 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC6A12P48065 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC6A12P48065 CYB5AP5-201ENST00000549779 389 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC6A12P48065 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SLC6A12P48065 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC6A12P48065 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC6A12P48065 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC6A12P48065 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC6A12P48065 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC6A12P48065 ATP5F1P7-201ENST00000567330 760 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 EIF1P6-201ENST00000600054 334 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC6A12P48065 AC093424.1-201ENST00000604999 338 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC6A12P48065 AC099669.2-201ENST00000616549 437 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 LINC00901.1-201ENST00000617252 152 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC6A12P48065 AC022079.2-201ENST00000619739 566 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 AC008785.1-201ENST00000624475 456 ntBASIC4.1□□□□□ -1.75
SLC6A12P48065 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SLC6A12P48065 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC6A12P48065 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC6A12P48065 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC6A12P48065 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
SLC6A12P48065 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SLC6A12P48065 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC6A12P48065 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SLC6A12P48065 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SLC6A12P48065 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
SLC6A12P48065 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC6A12P48065 AL512646.1-201ENST00000269395 1077 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 RNU1-132P-201ENST00000364300 164 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 U3.22-201ENST00000391120 215 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC6A12P48065 AC004987.3-201ENST00000413879 771 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 RPS12P23-201ENST00000419579 400 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 COX6CP17-201ENST00000421389 185 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC6A12P48065 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC6A12P48065 C4BPAP2-201ENST00000428434 478 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 NPM1P34-201ENST00000428821 893 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC6A12P48065 RPL23AP89-201ENST00000439324 255 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC6A12P48065 TPT1P12-201ENST00000448968 492 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 RAD23BP3-201ENST00000454157 1152 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 AC011276.1-201ENST00000469688 323 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 AC073522.1-201ENST00000483312 377 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 MTCO3P35-201ENST00000485582 781 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 MTCYBP35-201ENST00000503630 1137 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC6A12P48065 AC104108.1-201ENST00000509930 412 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC6A12P48065 AC112673.1-201ENST00000513168 575 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 OR8I1P-201ENST00000529291 931 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.09□□□□□ -1.75
SLC6A12P48065 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
SLC6A12P48065 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC6A12P48065 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC6A12P48065 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC6A12P48065 AP001180.3-201ENST00000582221 145 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.09□□□□□ -1.75
SLC6A12P48065 MIR4697-201ENST00000582977 78 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 AC113194.1-201ENST00000606037 500 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC6A12P48065 AL121873.1-201ENST00000616013 524 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 AC048344.4-201ENST00000619744 527 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 MIR7702-201ENST00000621931 59 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC6A12P48065 AC017104.5-201ENST00000637647 639 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 AC132825.7-201ENST00000638744 335 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC6A12P48065 DCAF13P3-201ENST00000561147 1334 ntBASIC4.09□□□□□ -1.75
SLC6A12P48065 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SLC6A12P48065 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
SLC6A12P48065 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.09□□□□□ -1.76
SLC6A12P48065 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.76
SLC6A12P48065 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
SLC6A12P48065 ASNSP1-204ENST00000641977 1664 ntBASIC4.09□□□□□ -1.76
SLC6A12P48065 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
SLC6A12P48065 ERCC6-202ENST00000374127 1782 ntBASIC4.09□□□□□ -1.76
SLC6A12P48065 AC011266.1-201ENST00000624119 3569 ntBASIC4.09□□□□□ -1.76
SLC6A12P48065 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SLC6A12P48065 AC046144.1-201ENST00000478559 1853 ntBASIC4.09□□□□□ -1.76
SLC6A12P48065 AC138393.1-206ENST00000540997 1886 ntBASIC4.09□□□□□ -1.76
SLC6A12P48065 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SLC6A12P48065 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.09□□□□□ -1.76
SLC6A12P48065 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SLC6A12P48065 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms