Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.2□□□□□ -1.74
SCN4AP35499 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
SCN4AP35499 AC104984.5-201ENST00000586878 94 ntBASIC4.2□□□□□ -1.74
SCN4AP35499 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.2□□□□□ -1.74
SCN4AP35499 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCN4AP35499 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.2□□□□□ -1.74
SCN4AP35499 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.2□□□□□ -1.74
SCN4AP35499 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCN4AP35499 AC018529.3-201ENST00000624212 2254 ntBASIC4.19□□□□□ -1.74
SCN4AP35499 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCN4AP35499 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCN4AP35499 FRG1CP-201ENST00000358464 769 ntBASIC4.19□□□□□ -1.74
SCN4AP35499 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN4AP35499 SDCBPP2-201ENST00000424643 885 ntBASIC4.19□□□□□ -1.74
SCN4AP35499 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN4AP35499 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.19□□□□□ -1.74
SCN4AP35499 AC004024.1-201ENST00000549244 247 ntBASIC4.19□□□□□ -1.74
SCN4AP35499 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.19□□□□□ -1.74
SCN4AP35499 AC073657.2-201ENST00000605661 303 ntBASIC4.19□□□□□ -1.74
SCN4AP35499 AC012603.1-201ENST00000606424 528 ntBASIC4.19□□□□□ -1.74
SCN4AP35499 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCN4AP35499 MTCO1P24-201ENST00000515438 1558 ntBASIC4.19□□□□□ -1.74
SCN4AP35499 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SCN4AP35499 AC018555.1-201ENST00000567548 1980 ntBASIC4.19□□□□□ -1.74
SCN4AP35499 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.19□□□□□ -1.74
SCN4AP35499 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCN4AP35499 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SCN4AP35499 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SCN4AP35499 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SCN4AP35499 RAC1P3-201ENST00000416129 580 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN4AP35499 AC107083.1-201ENST00000439643 279 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 AC098824.1-201ENST00000453565 980 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 AC138409.2-202ENST00000507274 458 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCN4AP35499 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN4AP35499 AC118465.1-201ENST00000513820 1271 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 SUMO2P20-201ENST00000520803 283 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.18□□□□□ -1.74
SCN4AP35499 MIR7106-201ENST00000612419 65 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN4AP35499 FAM35DP-201ENST00000323387 2712 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SCN4AP35499 AC092111.2-201ENST00000611627 1414 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCN4AP35499 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.18□□□□□ -1.74
SCN4AP35499 RNA5SP197-201ENST00000363357 119 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 RNU6-729P-201ENST00000384399 107 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 SNORA44-201ENST00000384584 132 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 AL158071.1-201ENST00000430315 461 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 ATP5HP2-201ENST00000433885 485 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN4AP35499 RPL7L1P1-201ENST00000448259 785 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN4AP35499 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN4AP35499 AC113192.3-201ENST00000529152 742 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SCN4AP35499 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.18□□□□□ -1.74
SCN4AP35499 AC127502.3-201ENST00000636170 1206 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN4AP35499 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.18□□□□□ -1.74
SCN4AP35499 Z83843.1-201ENST00000604070 3685 ntBASIC4.18□□□□□ -1.74
SCN4AP35499 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SCN4AP35499 TTC39DP-201ENST00000416781 1688 ntBASIC4.17□□□□□ -1.74
SCN4AP35499 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCN4AP35499 AC092435.3-201ENST00000565538 3654 ntBASIC4.17□□□□□ -1.74
SCN4AP35499 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCN4AP35499 RNU1-18P-201ENST00000363062 164 ntBASIC4.17□□□□□ -1.74
SCN4AP35499 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN4AP35499 RPL23AP48-201ENST00000406913 488 ntBASIC4.17□□□□□ -1.74
SCN4AP35499 AL691447.1-201ENST00000419456 387 ntBASIC4.17□□□□□ -1.74
SCN4AP35499 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN4AP35499 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.17□□□□□ -1.74
SCN4AP35499 NPM1P48-201ENST00000436002 853 ntBASIC4.17□□□□□ -1.74
SCN4AP35499 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN4AP35499 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN4AP35499 OR2A20P-203ENST00000498397 1268 ntBASIC4.17□□□□□ -1.74
SCN4AP35499 IGKV2-26-201ENST00000518305 343 ntBASIC4.17□□□□□ -1.74
SCN4AP35499 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.17□□□□□ -1.74
SCN4AP35499 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SCN4AP35499 AC090281.1-201ENST00000523019 276 ntBASIC4.17□□□□□ -1.74
SCN4AP35499 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.17□□□□□ -1.74
SCN4AP35499 AL163642.2-201ENST00000604722 1019 ntBASIC4.17□□□□□ -1.74
SCN4AP35499 HMGB1P50-201ENST00000605814 607 ntBASIC4.17□□□□□ -1.74
SCN4AP35499 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN4AP35499 AC016252.1-201ENST00000609721 474 ntBASIC4.17□□□□□ -1.74
SCN4AP35499 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
SCN4AP35499 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SCN4AP35499 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.17□□□□□ -1.74
SCN4AP35499 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SCN4AP35499 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SCN4AP35499 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCN4AP35499 IPO8P1-201ENST00000455509 3109 ntBASIC4.16□□□□□ -1.74
SCN4AP35499 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN4AP35499 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN4AP35499 AL445213.1-201ENST00000412589 747 ntBASIC4.16□□□□□ -1.74
SCN4AP35499 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.16□□□□□ -1.74
SCN4AP35499 RPS12P5-201ENST00000423449 371 ntBASIC4.16□□□□□ -1.74
SCN4AP35499 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.16□□□□□ -1.74
SCN4AP35499 AC105918.1-201ENST00000474399 838 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms