Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HOXD13P35453 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HOXD13P35453 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
HOXD13P35453 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXD13P35453 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HOXD13P35453 MFSD8-220ENST00000641243 1422 ntBASIC4.63□□□□□ -1.67
HOXD13P35453 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD13P35453 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
HOXD13P35453 AL136964.1-201ENST00000622038 2990 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
HOXD13P35453 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD13P35453 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
HOXD13P35453 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD13P35453 HSPD1P16-201ENST00000402302 394 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD13P35453 RPL31P45-201ENST00000419532 356 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.62□□□□□ -1.67
HOXD13P35453 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD13P35453 AC016712.1-201ENST00000431088 378 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD13P35453 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXD13P35453 MTCYBP42-201ENST00000444653 1130 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXD13P35453 AC009963.2-201ENST00000453431 138 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 RPL5P30-201ENST00000465511 891 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 AC109327.1-201ENST00000471666 403 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 AC087879.1-201ENST00000474343 374 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 RPL21P103-201ENST00000479921 488 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXD13P35453 CAB39P1-201ENST00000502277 460 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXD13P35453 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD13P35453 AC023632.1-201ENST00000518463 375 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 MTND2P26-201ENST00000528255 1029 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 OR4C2P-201ENST00000530855 1064 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.62□□□□□ -1.67
HOXD13P35453 CYCSP29-201ENST00000533731 318 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD13P35453 AC044913.1-201ENST00000557200 430 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 CYP4A43P-201ENST00000568156 121 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 AC007599.1-201ENST00000568688 1174 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 AC074051.3-201ENST00000570238 358 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 MIR4666A-201ENST00000580160 79 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 OR1AB1P-201ENST00000585564 761 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXD13P35453 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD13P35453 AL583856.2-201ENST00000606298 543 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 AL445423.1-201ENST00000609941 536 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD13P35453 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXD13P35453 AC099654.9-201ENST00000637055 678 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 AC099654.8-201ENST00000637757 681 ntBASIC4.62□□□□□ -1.67
HOXD13P35453 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD13P35453 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD13P35453 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXD13P35453 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD13P35453 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD13P35453 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXD13P35453 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD13P35453 SAGE4P-201ENST00000442271 3381 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HOXD13P35453 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HOXD13P35453 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HOXD13P35453 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HOXD13P35453 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HOXD13P35453 ATP5F1P2-201ENST00000398143 760 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 AC069218.2-201ENST00000411665 344 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXD13P35453 RWDD4P2-201ENST00000426392 563 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXD13P35453 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXD13P35453 AC104306.1-201ENST00000449702 371 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 TPT1P13-201ENST00000449760 499 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 snoU109.3-201ENST00000459477 145 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 RPS29P19-201ENST00000479709 171 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 HMGB3P13-201ENST00000511263 607 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD13P35453 RNA5SP135-201ENST00000517019 125 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 RAB9BP1-201ENST00000519581 626 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.61□□□□□ -1.67
HOXD13P35453 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD13P35453 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXD13P35453 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXD13P35453 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXD13P35453 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXD13P35453 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXD13P35453 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.61□□□□□ -1.67
HOXD13P35453 RN7SL600P-201ENST00000581811 299 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 AP001180.3-201ENST00000582221 145 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 AC096947.1-201ENST00000603233 470 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 OR6R2P-201ENST00000609216 300 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXD13P35453 AC067931.1-201ENST00000624190 671 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 MIR3653-201ENST00000625572 110 ntBASIC4.61□□□□□ -1.67
HOXD13P35453 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXD13P35453 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD13P35453 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXD13P35453 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXD13P35453 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms