Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AC116533.1-201ENST00000459748 321 ntBASIC4.05□□□□□ -1.76
CASQ1P31415 RPL21P11-201ENST00000461458 483 ntBASIC4.05□□□□□ -1.76
CASQ1P31415 RPS27AP1-201ENST00000475545 471 ntBASIC4.05□□□□□ -1.76
CASQ1P31415 RPL23AP55-201ENST00000498163 452 ntBASIC4.05□□□□□ -1.76
CASQ1P31415 AC108941.1-201ENST00000502853 530 ntBASIC4.05□□□□□ -1.76
CASQ1P31415 NDUFB9P3-201ENST00000521269 501 ntBASIC4.05□□□□□ -1.76
CASQ1P31415 AL163153.1-201ENST00000554223 283 ntBASIC4.05□□□□□ -1.76
CASQ1P31415 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.05□□□□□ -1.76
CASQ1P31415 SNRPGP15-201ENST00000600149 222 ntBASIC4.05□□□□□ -1.76
CASQ1P31415 AC011816.2-201ENST00000607089 556 ntBASIC4.05□□□□□ -1.76
CASQ1P31415 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.05□□□□□ -1.76
CASQ1P31415 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.05□□□□□ -1.76
CASQ1P31415 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CASQ1P31415 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CASQ1P31415 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CASQ1P31415 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CASQ1P31415 AC022031.1-201ENST00000585985 2593 ntBASIC4.05□□□□□ -1.76
CASQ1P31415 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CASQ1P31415 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CASQ1P31415 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.04□□□□□ -1.76
CASQ1P31415 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CASQ1P31415 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CASQ1P31415 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CASQ1P31415 MIR199A2-201ENST00000385289 110 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 TPT1P2-201ENST00000413105 503 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 NUP35P2-201ENST00000416748 943 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.04□□□□□ -1.76
CASQ1P31415 AC069213.2-201ENST00000420238 366 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 AC244098.2-201ENST00000422068 99 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.04□□□□□ -1.76
CASQ1P31415 HMGN2P20-201ENST00000437531 273 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 AL590399.6-201ENST00000446396 307 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 AC006539.3-201ENST00000454258 129 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 AL132838.2-201ENST00000492041 314 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 RPL23AP73-201ENST00000492507 471 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.04□□□□□ -1.76
CASQ1P31415 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.04□□□□□ -1.76
CASQ1P31415 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.04□□□□□ -1.76
CASQ1P31415 RAC1P2-201ENST00000511164 579 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 AC010265.1-201ENST00000513509 211 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.04□□□□□ -1.76
CASQ1P31415 RN7SKP92-201ENST00000517266 244 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CASQ1P31415 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.04□□□□□ -1.76
CASQ1P31415 AP002812.4-201ENST00000532139 286 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 AC068831.4-201ENST00000556118 109 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 AC037471.2-201ENST00000564941 598 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 MIR4436B2-201ENST00000581415 91 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 MIR4436B1-201ENST00000583272 91 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.04□□□□□ -1.76
CASQ1P31415 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.04□□□□□ -1.76
CASQ1P31415 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CASQ1P31415 AL365400.2-201ENST00000605604 902 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.04□□□□□ -1.76
CASQ1P31415 FAM25E-202ENST00000608562 189 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 AL161616.1-201ENST00000611867 286 ntBASIC4.04□□□□□ -1.76
CASQ1P31415 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CASQ1P31415 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CASQ1P31415 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.04□□□□□ -1.76
CASQ1P31415 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.04□□□□□ -1.76
CASQ1P31415 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CASQ1P31415 AL136164.4-201ENST00000625013 2135 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.03□□□□□ -1.76
CASQ1P31415 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CASQ1P31415 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.03□□□□□ -1.76
CASQ1P31415 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CASQ1P31415 RPS26P8-201ENST00000393490 348 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.03□□□□□ -1.76
CASQ1P31415 AC006989.1-201ENST00000427212 131 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 AL158071.1-201ENST00000430315 461 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 VDAC1P3-201ENST00000434069 851 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.03□□□□□ -1.76
CASQ1P31415 PPIAP20-201ENST00000449839 135 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 BX276092.4-201ENST00000452056 248 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 AC041039.1-201ENST00000485656 536 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 AK3P4-201ENST00000504283 583 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.03□□□□□ -1.76
CASQ1P31415 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.03□□□□□ -1.76
CASQ1P31415 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.03□□□□□ -1.76
CASQ1P31415 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CASQ1P31415 UBE2NP1-201ENST00000545592 458 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 AC074029.1-201ENST00000552531 1044 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.03□□□□□ -1.76
CASQ1P31415 ZNF92P3-201ENST00000596594 954 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 AC020915.5-201ENST00000596836 964 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.03□□□□□ -1.76
CASQ1P31415 AC112230.1-201ENST00000604342 547 ntBASIC4.03□□□□□ -1.76
CASQ1P31415 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.03□□□□□ -1.76
CASQ1P31415 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.03□□□□□ -1.76
CASQ1P31415 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.03□□□□□ -1.76
CASQ1P31415 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.03□□□□□ -1.76
CASQ1P31415 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.02□□□□□ -1.77
CASQ1P31415 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CASQ1P31415 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CASQ1P31415 MIR1178-201ENST00000408396 91 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 RNU2-71P-201ENST00000411395 189 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.02□□□□□ -1.77
CASQ1P31415 AC017079.2-201ENST00000416102 485 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.02□□□□□ -1.77
CASQ1P31415 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms