Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.64□□□□□ -1.35
VARSP26640 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 AL136531.3-201ENST00000624378 3658 ntBASIC6.64□□□□□ -1.35
VARSP26640 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 HSPA8P18-201ENST00000439846 1928 ntBASIC6.64□□□□□ -1.35
VARSP26640 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VARSP26640 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.63□□□□□ -1.35
VARSP26640 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VARSP26640 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
VARSP26640 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VARSP26640 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VARSP26640 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VARSP26640 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VARSP26640 SNORD3E-201ENST00000362899 217 ntBASIC6.63□□□□□ -1.35
VARSP26640 RNU1-85P-201ENST00000364127 164 ntBASIC6.63□□□□□ -1.35
VARSP26640 RNU6-593P-201ENST00000364716 112 ntBASIC6.63□□□□□ -1.35
VARSP26640 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
VARSP26640 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VARSP26640 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VARSP26640 MIR187-201ENST00000385062 109 ntBASIC6.63□□□□□ -1.35
VARSP26640 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.63□□□□□ -1.35
VARSP26640 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.63□□□□□ -1.35
VARSP26640 RNU2-36P-201ENST00000410361 191 ntBASIC6.63□□□□□ -1.35
VARSP26640 RN7SKP235-201ENST00000410662 305 ntBASIC6.63□□□□□ -1.35
VARSP26640 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.63□□□□□ -1.35
VARSP26640 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.63□□□□□ -1.35
VARSP26640 ATG3P1-201ENST00000419507 911 ntBASIC6.63□□□□□ -1.35
VARSP26640 OR2AS1P-201ENST00000427827 319 ntBASIC6.63□□□□□ -1.35
VARSP26640 AL451139.1-201ENST00000434718 346 ntBASIC6.63□□□□□ -1.35
VARSP26640 TIMM9P1-201ENST00000436122 256 ntBASIC6.63□□□□□ -1.35
VARSP26640 RPL7P28-201ENST00000437739 740 ntBASIC6.63□□□□□ -1.35
VARSP26640 RNU6-1132P-201ENST00000459214 107 ntBASIC6.63□□□□□ -1.35
VARSP26640 SLC25A15P5-201ENST00000508033 253 ntBASIC6.63□□□□□ -1.35
VARSP26640 TXNP6-201ENST00000510190 310 ntBASIC6.63□□□□□ -1.35
VARSP26640 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VARSP26640 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.63□□□□□ -1.35
VARSP26640 AL135978.1-201ENST00000553618 1266 ntBASIC6.63□□□□□ -1.35
VARSP26640 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.63□□□□□ -1.35
VARSP26640 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.63□□□□□ -1.35
VARSP26640 DHX40P1-201ENST00000588725 1412 ntBASIC6.63□□□□□ -1.35
VARSP26640 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.63□□□□□ -1.35
VARSP26640 AC036176.3-201ENST00000602456 418 ntBASIC6.63□□□□□ -1.35
VARSP26640 AC092747.3-201ENST00000603769 301 ntBASIC6.63□□□□□ -1.35
VARSP26640 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.63□□□□□ -1.35
VARSP26640 AL031666.3-201ENST00000609320 1006 ntBASIC6.63□□□□□ -1.35
VARSP26640 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.63□□□□□ -1.35
VARSP26640 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VARSP26640 AL159972.1-201ENST00000625150 448 ntBASIC6.63□□□□□ -1.35
VARSP26640 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VARSP26640 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VARSP26640 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.63□□□□□ -1.35
VARSP26640 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
VARSP26640 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
VARSP26640 AC091812.1-201ENST00000432235 1948 ntBASIC6.62□□□□□ -1.35
VARSP26640 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.62□□□□□ -1.35
VARSP26640 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VARSP26640 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VARSP26640 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.62□□□□□ -1.35
VARSP26640 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
VARSP26640 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VARSP26640 AL512329.1-201ENST00000404600 1592 ntBASIC6.62□□□□□ -1.35
VARSP26640 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VARSP26640 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VARSP26640 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.62□□□□□ -1.35
VARSP26640 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.62□□□□□ -1.35
VARSP26640 Y_RNA.350-201ENST00000365409 98 ntBASIC6.62□□□□□ -1.35
VARSP26640 RN7SKP187-201ENST00000365536 330 ntBASIC6.62□□□□□ -1.35
VARSP26640 RHOT1P2-201ENST00000366423 333 ntBASIC6.62□□□□□ -1.35
VARSP26640 RNU6-641P-201ENST00000384006 107 ntBASIC6.62□□□□□ -1.35
VARSP26640 Y_RNA.515-201ENST00000384535 112 ntBASIC6.62□□□□□ -1.35
VARSP26640 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
VARSP26640 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VARSP26640 AL391417.1-201ENST00000404100 426 ntBASIC6.62□□□□□ -1.35
VARSP26640 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.62□□□□□ -1.35
VARSP26640 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.62□□□□□ -1.35
VARSP26640 AL139184.1-202ENST00000422303 222 ntBASIC6.62□□□□□ -1.35
VARSP26640 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.62□□□□□ -1.35
VARSP26640 GAPDHP57-201ENST00000424400 585 ntBASIC6.62□□□□□ -1.35
VARSP26640 MTND5P15-201ENST00000434246 349 ntBASIC6.62□□□□□ -1.35
VARSP26640 AC003989.1-201ENST00000434569 565 ntBASIC6.62□□□□□ -1.35
VARSP26640 MYL6P3-201ENST00000436904 432 ntBASIC6.62□□□□□ -1.35
VARSP26640 CBX1P4-201ENST00000439415 457 ntBASIC6.62□□□□□ -1.35
VARSP26640 DYNLT3P2-201ENST00000442517 295 ntBASIC6.62□□□□□ -1.35
VARSP26640 AC019185.1-201ENST00000442718 389 ntBASIC6.62□□□□□ -1.35
VARSP26640 AC005297.2-201ENST00000450430 606 ntBASIC6.62□□□□□ -1.35
VARSP26640 AC022080.2-201ENST00000452932 533 ntBASIC6.62□□□□□ -1.35
VARSP26640 AL034369.1-201ENST00000453808 477 ntBASIC6.62□□□□□ -1.35
VARSP26640 RN7SL492P-201ENST00000460700 295 ntBASIC6.62□□□□□ -1.35
VARSP26640 AL117692.1-201ENST00000494283 713 ntBASIC6.62□□□□□ -1.35
VARSP26640 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.62□□□□□ -1.35
VARSP26640 RNU6-1016P-201ENST00000516689 94 ntBASIC6.62□□□□□ -1.35
VARSP26640 IGLC4-201ENST00000517690 248 ntBASIC6.62□□□□□ -1.35
VARSP26640 AC073581.1-201ENST00000519036 575 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms