Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.68□□□□□ -1.34
RFX1P22670 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.68□□□□□ -1.34
RFX1P22670 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.68□□□□□ -1.34
RFX1P22670 PRMT5P1-201ENST00000514351 598 ntBASIC6.68□□□□□ -1.34
RFX1P22670 Y_RNA.675-201ENST00000516389 149 ntBASIC6.68□□□□□ -1.34
RFX1P22670 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.68□□□□□ -1.34
RFX1P22670 RN7SKP35-201ENST00000517210 151 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.68□□□□□ -1.34
RFX1P22670 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.68□□□□□ -1.34
RFX1P22670 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.68□□□□□ -1.34
RFX1P22670 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.68□□□□□ -1.34
RFX1P22670 AC068993.1-201ENST00000546724 589 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.68□□□□□ -1.34
RFX1P22670 HAUS8P1-201ENST00000549005 542 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AC124068.1-201ENST00000563131 678 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AP005119.1-201ENST00000580956 292 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AC020916.2-201ENST00000591242 360 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AC013553.2-201ENST00000604244 589 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AL591167.1-201ENST00000607321 456 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AC022106.2-201ENST00000620114 757 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AL356585.4-201ENST00000623078 1229 ntBASIC6.68□□□□□ -1.34
RFX1P22670 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RFX1P22670 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.68□□□□□ -1.34
RFX1P22670 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RFX1P22670 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RFX1P22670 AC011460.1-201ENST00000636268 1834 ntBASIC6.68□□□□□ -1.34
RFX1P22670 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RFX1P22670 AF287957.1-201ENST00000607368 1595 ntBASIC6.68□□□□□ -1.34
RFX1P22670 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RFX1P22670 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RFX1P22670 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RFX1P22670 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RFX1P22670 AC009902.3-201ENST00000606235 2172 ntBASIC6.68□□□□□ -1.34
RFX1P22670 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RFX1P22670 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RFX1P22670 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RFX1P22670 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RFX1P22670 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RFX1P22670 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RFX1P22670 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RFX1P22670 AC079753.1-201ENST00000623243 3868 ntBASIC6.67□□□□□ -1.34
RFX1P22670 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RFX1P22670 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RFX1P22670 AL662795.2-201ENST00000624252 3706 ntBASIC6.67□□□□□ -1.34
RFX1P22670 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.67□□□□□ -1.34
RFX1P22670 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RFX1P22670 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.67□□□□□ -1.34
RFX1P22670 Y_RNA.166-201ENST00000363730 102 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AL356057.2-201ENST00000403318 432 ntBASIC6.67□□□□□ -1.34
RFX1P22670 RN7SKP235-201ENST00000410662 305 ntBASIC6.67□□□□□ -1.34
RFX1P22670 EEF1A1P40-201ENST00000412883 573 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AL807761.1-201ENST00000417622 171 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AL592293.2-201ENST00000422292 996 ntBASIC6.67□□□□□ -1.34
RFX1P22670 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.67□□□□□ -1.34
RFX1P22670 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.67□□□□□ -1.34
RFX1P22670 UBE2V1P13-201ENST00000436983 439 ntBASIC6.67□□□□□ -1.34
RFX1P22670 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RFX1P22670 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.67□□□□□ -1.34
RFX1P22670 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.67□□□□□ -1.34
RFX1P22670 OR7E116P-201ENST00000448529 957 ntBASIC6.67□□□□□ -1.34
RFX1P22670 RPL23AP60-201ENST00000450011 454 ntBASIC6.67□□□□□ -1.34
RFX1P22670 MTND6P8-201ENST00000503471 522 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AK3P4-201ENST00000504283 583 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.67□□□□□ -1.34
RFX1P22670 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.67□□□□□ -1.34
RFX1P22670 MTND6P2-201ENST00000512226 524 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.67□□□□□ -1.34
RFX1P22670 AC060775.1-201ENST00000518241 520 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AC100784.1-201ENST00000522790 310 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.67□□□□□ -1.34
RFX1P22670 OR4T1P-201ENST00000554933 911 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.67□□□□□ -1.34
RFX1P22670 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.67□□□□□ -1.34
RFX1P22670 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.67□□□□□ -1.34
RFX1P22670 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.67□□□□□ -1.34
RFX1P22670 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.67□□□□□ -1.34
RFX1P22670 AC068790.3-201ENST00000602988 553 ntBASIC6.67□□□□□ -1.34
RFX1P22670 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.67□□□□□ -1.34
RFX1P22670 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AC126177.8-201ENST00000618339 1015 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AL137067.2-201ENST00000621202 131 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AC127024.6-201ENST00000621598 424 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AC079597.1-201ENST00000624306 508 ntBASIC6.67□□□□□ -1.34
RFX1P22670 AC027088.4-201ENST00000611559 1947 ntBASIC6.67□□□□□ -1.34
RFX1P22670 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RFX1P22670 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RFX1P22670 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
RFX1P22670 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RFX1P22670 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.67□□□□□ -1.34
RFX1P22670 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.67□□□□□ -1.34
RFX1P22670 AC114546.3-201ENST00000623582 1734 ntBASIC6.67□□□□□ -1.34
RFX1P22670 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RFX1P22670 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
RFX1P22670 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.66□□□□□ -1.34
RFX1P22670 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RFX1P22670 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX1P22670 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
RFX1P22670 AC105074.1-201ENST00000623380 3095 ntBASIC6.66□□□□□ -1.34
RFX1P22670 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms