Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.43□□□□□ -1.38
ERCC3P19447 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC3P19447 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC3P19447 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.43□□□□□ -1.38
ERCC3P19447 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC3P19447 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.43□□□□□ -1.38
ERCC3P19447 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ERCC3P19447 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ERCC3P19447 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.42□□□□□ -1.38
ERCC3P19447 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC3P19447 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC3P19447 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
ERCC3P19447 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC3P19447 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC3P19447 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.42□□□□□ -1.38
ERCC3P19447 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ERCC3P19447 RNA5SP335-201ENST00000363817 110 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 RPL31P1-201ENST00000398116 372 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC6.42□□□□□ -1.38
ERCC3P19447 AL592293.2-201ENST00000422292 996 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 AL445669.1-201ENST00000426743 755 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.42□□□□□ -1.38
ERCC3P19447 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.42□□□□□ -1.38
ERCC3P19447 AL450263.2-201ENST00000439400 589 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC6.42□□□□□ -1.38
ERCC3P19447 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.42□□□□□ -1.38
ERCC3P19447 HMGB1P15-201ENST00000453854 435 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 RPS3AP17-201ENST00000472594 777 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 AC023424.2-201ENST00000493479 777 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.42□□□□□ -1.38
ERCC3P19447 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 AC109927.2-201ENST00000506416 303 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 KCTD9P2-201ENST00000512203 1013 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 AC011352.1-201ENST00000512300 793 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.42□□□□□ -1.38
ERCC3P19447 RNU6-506P-201ENST00000516553 94 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 AC078899.1-201ENST00000521432 1185 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.42□□□□□ -1.38
ERCC3P19447 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.42□□□□□ -1.38
ERCC3P19447 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC6.42□□□□□ -1.38
ERCC3P19447 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.42□□□□□ -1.38
ERCC3P19447 AL121612.2-201ENST00000612261 482 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 AC025574.2-201ENST00000615621 514 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 AC015908.5-201ENST00000623289 343 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 AC095031.1-201ENST00000623685 672 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 OR5H6-203ENST00000642105 978 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 AC020656.2-201ENST00000613291 5309 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC3P19447 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ERCC3P19447 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC3P19447 AL592148.3-201ENST00000608771 2646 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.42□□□□□ -1.38
ERCC3P19447 AC005832.2-201ENST00000538921 1430 ntBASIC6.42□□□□□ -1.38
ERCC3P19447 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ERCC3P19447 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ERCC3P19447 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ERCC3P19447 HSPA8P18-201ENST00000439846 1928 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 AC011155.1-201ENST00000316512 456 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 AC005294.1-201ENST00000355509 281 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 RN7SKP6-201ENST00000364795 319 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 RNU6-744P-201ENST00000365557 107 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 RNU6-1316P-201ENST00000384242 108 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 FCF1P10-201ENST00000407590 479 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 MIR548F1-201ENST00000408667 84 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 RNU2-21P-201ENST00000410368 188 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 AC004987.3-201ENST00000413879 771 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 METTL15P3-201ENST00000415522 1221 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 RPL31P45-201ENST00000419532 356 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 HMGN2P27-201ENST00000427352 270 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 AP000542.1-201ENST00000448473 371 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.41□□□□□ -1.38
ERCC3P19447 RPL12P39-201ENST00000455456 496 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ERCC3P19447 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.41□□□□□ -1.38
ERCC3P19447 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
ERCC3P19447 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.41□□□□□ -1.38
ERCC3P19447 IGLVIV-53-201ENST00000520107 367 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.41□□□□□ -1.38
ERCC3P19447 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.41□□□□□ -1.38
ERCC3P19447 AC053481.3-201ENST00000577881 843 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 MIR4716-201ENST00000579628 84 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.41□□□□□ -1.38
ERCC3P19447 AC109347.2-201ENST00000610220 349 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 AC024941.1-201ENST00000612250 334 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 AC104010.1-201ENST00000616889 150 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ERCC3P19447 AL122126.1-201ENST00000546905 1318 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 KYNUP3-201ENST00000574386 1341 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 AL591135.1-201ENST00000401578 5914 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
ERCC3P19447 AC007529.1-201ENST00000418574 2178 ntBASIC6.41□□□□□ -1.38
ERCC3P19447 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
ERCC3P19447 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.41□□□□□ -1.38
ERCC3P19447 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.41□□□□□ -1.38
ERCC3P19447 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ERCC3P19447 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC3P19447 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC3P19447 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ERCC3P19447 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ERCC3P19447 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms