Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC019176.2-201ENST00000611579 315 ntBASIC2.77□□□□□ -1.97
CCL3L1P16619 uc_338.32-201ENST00000615087 172 ntBASIC2.77□□□□□ -1.97
CCL3L1P16619 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCL3L1P16619 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.77□□□□□ -1.97
CCL3L1P16619 ASNSP1-201ENST00000518311 1939 ntBASIC2.77□□□□□ -1.97
CCL3L1P16619 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCL3L1P16619 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCL3L1P16619 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
CCL3L1P16619 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCL3L1P16619 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCL3L1P16619 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC2.77□□□□□ -1.97
CCL3L1P16619 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCL3L1P16619 PRO1804-201ENST00000623780 2050 ntBASIC2.77□□□□□ -1.97
CCL3L1P16619 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCL3L1P16619 AC106871.1-201ENST00000568324 3102 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CCL3L1P16619 MIR423-201ENST00000362201 94 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 RNU6-984P-201ENST00000363236 109 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 AC234772.1-201ENST00000377927 937 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 MIR7-3-201ENST00000384898 110 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 MIR708-201ENST00000390708 88 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 RN7SKP111-201ENST00000410349 271 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 RHEBP3-201ENST00000411920 351 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 RAC1P3-201ENST00000416129 580 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 PRDX3P3-201ENST00000447765 522 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 AL358232.1-201ENST00000448030 501 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 MTND4LP12-201ENST00000448237 295 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 PRSS3P4-201ENST00000453323 162 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.76□□□□□ -1.97
CCL3L1P16619 HSPE1P22-201ENST00000456856 327 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 RPS4XP10-201ENST00000465034 731 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 AC007537.2-201ENST00000472093 511 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 RPL7P38-201ENST00000488396 739 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 RPL7P47-201ENST00000497299 556 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 HMGB1P21-201ENST00000502313 581 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 LDHBP3-201ENST00000514909 822 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.76□□□□□ -1.97
CCL3L1P16619 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.76□□□□□ -1.97
CCL3L1P16619 NCAPGP2-201ENST00000557911 754 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.76□□□□□ -1.97
CCL3L1P16619 AC015917.1-201ENST00000579654 510 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 MIR4425-201ENST00000580572 84 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.76□□□□□ -1.97
CCL3L1P16619 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.76□□□□□ -1.97
CCL3L1P16619 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.76□□□□□ -1.97
CCL3L1P16619 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC2.76□□□□□ -1.97
CCL3L1P16619 AC243654.2-201ENST00000612843 443 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 AL392048.1-201ENST00000613946 534 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 MIR6075-201ENST00000620782 95 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 AC110801.1-201ENST00000623590 212 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 AP003400.2-201ENST00000624036 666 ntBASIC2.76□□□□□ -1.97
CCL3L1P16619 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCL3L1P16619 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCL3L1P16619 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.76□□□□□ -1.97
CCL3L1P16619 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.76□□□□□ -1.97
CCL3L1P16619 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 RPS4XP5-202ENST00000449995 1334 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
CCL3L1P16619 RNU1-33P-201ENST00000364249 162 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCL3L1P16619 AC127526.1-201ENST00000417526 366 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 RPS12P5-201ENST00000423449 371 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 AC097713.2-201ENST00000430199 356 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC2.75□□□□□ -1.97
CCL3L1P16619 RPL6P5-201ENST00000445678 828 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.75□□□□□ -1.97
CCL3L1P16619 RPL12P26-201ENST00000452430 487 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.75□□□□□ -1.97
CCL3L1P16619 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.75□□□□□ -1.97
CCL3L1P16619 AC105918.1-201ENST00000474399 838 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 AC073522.1-201ENST00000483312 377 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.75□□□□□ -1.97
CCL3L1P16619 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC2.75□□□□□ -1.97
CCL3L1P16619 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC2.75□□□□□ -1.97
CCL3L1P16619 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.75□□□□□ -1.97
CCL3L1P16619 AC092868.3-201ENST00000560515 784 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 AC053481.3-201ENST00000577881 843 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 AL034351.1-201ENST00000605288 668 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 AC244100.1-202ENST00000621554 382 ntBASIC2.75□□□□□ -1.97
CCL3L1P16619 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCL3L1P16619 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.75□□□□□ -1.97
CCL3L1P16619 CR383658.2-201ENST00000547576 1525 ntBASIC2.74□□□□□ -1.97
CCL3L1P16619 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCL3L1P16619 AC022893.2-201ENST00000564832 3296 ntBASIC2.74□□□□□ -1.97
CCL3L1P16619 AC018529.3-201ENST00000624212 2254 ntBASIC2.74□□□□□ -1.97
CCL3L1P16619 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
CCL3L1P16619 MIR365B-201ENST00000362317 111 ntBASIC2.74□□□□□ -1.97
CCL3L1P16619 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC2.74□□□□□ -1.97
CCL3L1P16619 AP002088.1-201ENST00000382740 395 ntBASIC2.74□□□□□ -1.97
CCL3L1P16619 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCL3L1P16619 MIR184-201ENST00000384962 84 ntBASIC2.74□□□□□ -1.97
CCL3L1P16619 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CCL3L1P16619 RANP4-201ENST00000413361 655 ntBASIC2.74□□□□□ -1.97
CCL3L1P16619 RPS7P15-201ENST00000415804 584 ntBASIC2.74□□□□□ -1.97
CCL3L1P16619 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCL3L1P16619 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.74□□□□□ -1.97
CCL3L1P16619 RPF2P1-201ENST00000424137 906 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms